Pairwise Alignments

Query, 319 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1077 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  173 bits (439), Expect = 2e-47
 Identities = 94/273 (34%), Positives = 148/273 (54%)

Query: 20  VLITERSGSIVWLNKAFCLMSGYSKQELVGKTPHLLSSGRQSTTFYRNLWMTIMAGLSWQ 79
           +++T+    I  +N AF  ++GYS +++ G++P +LSS R  + FY  +W  +     W+
Sbjct: 521 IMVTDADNHIELVNPAFSQITGYSLEDVKGRSPSMLSSKRHPSHFYTAMWEALQKDSKWE 580

Query: 80  GEMVERRKDGGTCTVNQIITPVLDQDGVVTHFIAILHNFSLIDEERAAMQQLAFHDALTG 139
           GE+  +RKDG        IT V ++ G +   I +  + S   +    +   A  D LTG
Sbjct: 581 GEIWNKRKDGQVYPEYLAITVVRNERGEIIQHIGLFMDISKRKQYEQDLWYQAHFDTLTG 640

Query: 140 LPNRLLFLNLLNQAINGAIKYKQPLALMFIDLDHFKSINDTLGHACGDRLLVAVAERLGQ 199
           LPNR LF   L   I  A    + LA++ IDLD FK IND  GHA GD LL  VA+RL  
Sbjct: 641 LPNRKLFNERLQHEIQLAQHDSRKLAILLIDLDQFKYINDVQGHATGDLLLQDVAKRLEN 700

Query: 200 SVRRSDVVARLSGDEFAILISGVDQIDQLEPLANKLVAAIHQPFMVDNHRIETAISIGIS 259
              ++D++AR+ GDEF +++  V     +E +A++++  +  PF ++   I+ + S GI 
Sbjct: 701 IAGKNDLIARIGGDEFVLILPRVTNEFAIEHMASRIIETLSTPFNLNEREIQISASFGIG 760

Query: 260 LFHGDGSSVDDLLAQADSAMYQAKRNGGNGCRF 292
           ++  DG  V  L    + AMYQAK  G N  ++
Sbjct: 761 VYPEDGLDVSSLTRNTEMAMYQAKDAGRNNFKY 793