Pairwise Alignments

Query, 304 a.a., universal stress protein from Pseudomonas simiae WCS417

Subject, 315 a.a., universal stress protein UspE from Vibrio cholerae E7946 ATCC 55056

 Score =  109 bits (272), Expect = 9e-29
 Identities = 85/307 (27%), Positives = 139/307 (45%), Gaps = 9/307 (2%)

Query: 1   MSQIQRLLLIAPPAMIRTPAFERATALARAMQLPLHIVAF--DYLQALAVAGLFAPEQMG 58
           MS   ++L++A       PA  RA  LA+      HI  F   Y  +  +  + + E+  
Sbjct: 1   MSIYSKILVVADINHDEQPALARAMQLAQKSTSVSHITFFLSIYDFSYDMTSMLSLEERD 60

Query: 59  VAREGYLQTHRQWLAEQAELMSKHGVAVSSEVVWVQHPYEEILHFVSELPLALIIKDAHE 118
             R+G +    QW+   AE      V    +VVW   PYE I+  +      ++IK   +
Sbjct: 61  AMRKGVIHQREQWMRSIAEPYLDKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRK 120

Query: 119 ESALKRIFFTPLDWQLLRDCPVPVHLVINDLHARPRQILAIVDVLRSEEQDQVFNDQIID 178
              L+ + FTP DW L+R CP PV LV N        I+A V V    +     ND++++
Sbjct: 121 HDMLESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIASVHVGSELDTHIDLNDRMVE 180

Query: 179 AAVKLAEQCGATLELVHVYDWMAVYATDMGVGALPL--ATGLYEALGSAEREAFAALAER 236
             + L+++ GA+  LV+ Y       T      LP    T   +A+      A  AL ++
Sbjct: 181 QLLNLSKRLGASPYLVNAYPVTPANITI----ELPEFDPTTYTDAVRGHHLTAMKALRQK 236

Query: 237 HHVAPQNRHFIEGAAVPGICEFATKHATDVIVMGTVQHHGLSKL-LGTTAEQLLHRAPCS 295
           H ++ +     +G     I E A +    ++++GT    GLS + +G TAE ++ +  C 
Sbjct: 237 HGLSEEQTLVQQGLPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEHVIDKINCD 296

Query: 296 VWAIKPS 302
           V A+KP+
Sbjct: 297 VLALKPN 303