Pairwise Alignments

Query, 304 a.a., universal stress protein from Pseudomonas simiae WCS417

Subject, 310 a.a., universal stress protein UspE (RefSeq) from Shewanella loihica PV-4

 Score =  127 bits (318), Expect = 4e-34
 Identities = 85/303 (28%), Positives = 138/303 (45%), Gaps = 5/303 (1%)

Query: 1   MSQIQRLLLIAPPAMIRTPAFERATALARAMQLPLHIVAFDYLQALAVAGLFAPEQMGVA 60
           M    ++L++  P   +  A  RA  LA   Q  + +    +  +  +  + +  +    
Sbjct: 1   MKDYHKILVVVDPTSDKQSALARAVELASKNQASITVFLSIFDFSYEMTSILSGHEREAM 60

Query: 61  REGYLQTHRQWLAEQAELMSKHGVAVSSEVVWVQHPYEEILHFVSELPLALIIKDAHEES 120
           R+G +   R WL +        GVA+ SEV+W   P+E I+    E    LI+K  HE  
Sbjct: 61  RQGVIAQRRAWLDDILGGYKDSGVAIDSEVIWHNRPFESIILHAIEGSYDLIVKGTHEHD 120

Query: 121 ALKRIFFTPLDWQLLRDCPVPVHLVINDLHARPRQILAIVDVLRSEEQDQVFNDQIIDAA 180
            LK + FTP DW L+R  PVPV LV         +IL  ++V   ++  Q  N +II+ A
Sbjct: 121 KLKSVIFTPTDWHLMRKAPVPVLLVKEHDWPVAGKILCAINVASEDDDHQTLNGKIIEHA 180

Query: 181 VKLAEQCGATLELVHVYDWMAVYATDMGVGALPLATGLY-EALGSAEREAFAALAERHHV 239
           + LA++  A + LV+ Y    V   ++ +         Y E +     +    LA  + +
Sbjct: 181 LDLAKKFDAQVHLVNGYPGTPV---NLAIELPDFDAHTYSETIRMQHEQRVCYLASNYGI 237

Query: 240 APQNRHFIEGAAVPGICEFATKHATDVIVMGTVQHHGLS-KLLGTTAEQLLHRAPCSVWA 298
           +    H  EG     I E A +   +++++GTV   G S  L+G TAE ++    C + A
Sbjct: 238 SSDFCHIKEGLPEDVIPELAEQLDAELVILGTVGRTGFSAALIGNTAEHVIDSINCDLLA 297

Query: 299 IKP 301
           IKP
Sbjct: 298 IKP 300