Pairwise Alignments

Query, 245 a.a., 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) from Pseudomonas simiae WCS417

Subject, 245 a.a., 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) from Shewanella amazonensis SB2B

 Score =  128 bits (322), Expect = 9e-35
 Identities = 91/245 (37%), Positives = 123/245 (50%), Gaps = 13/245 (5%)

Query: 2   LIIPAIDLKDGACVRLRQGRMEDSTVFSDDPVSMAAKWVEGGCRRLHLVDLNGAFEGQPV 61
           +IIPAIDL DG  VRL QG     T FS DP +    + + G   LHLVDL GA +    
Sbjct: 1   MIIPAIDLIDGQVVRLFQGDYAKKTEFSLDPKNQLLSYQQDGAALLHLVDLTGAKDPDKR 60

Query: 62  NGEVVTAIAKRYPSLPIQIGGGIRSLETIEHYVKAGVSYVIIGTKAVKDPAFVAEACRAF 121
             +++  IA    S P+Q+GGGIRS   ++  + AGV+ V+IG+ AVK P  V      +
Sbjct: 61  QTKLIEEIAASL-STPLQVGGGIRSAADVDALLNAGVARVVIGSLAVKSPEVVLRLFDKY 119

Query: 122 PGKVI-----VGLDAKDG--FVATDGWAEISTVQVIDLAKQFEADGVSAIVYTDIAKDGM 174
            G  I     V +DA DG   VA  GW +     +  L   F   G+   + TDI++DG 
Sbjct: 120 GGDAICLALDVNIDA-DGNKMVAVHGWQQGGGKSLESLVDTFMPAGLKHALVTDISRDGT 178

Query: 175 MQGCNVPFTAALAAA-TKIPVIASGGIHNLGDIKSLLDAKAPGIIGAITGRAIYEGTLDV 233
           M G N      LA    ++   ASGG+  L D+K++   K  G  G I G+A+  G    
Sbjct: 179 MTGANTALYCELAERFNEVQWQASGGVATLDDVKAV---KTSGASGIIIGKALLTGVFSA 235

Query: 234 AEAQA 238
            EA A
Sbjct: 236 KEAIA 240



 Score = 29.6 bits (65), Expect = 6e-05
 Identities = 18/89 (20%), Positives = 39/89 (43%)

Query: 34  SMAAKWVEGGCRRLHLVDLNGAFEGQPVNGEVVTAIAKRYPSLPIQIGGGIRSLETIEHY 93
           S+   ++  G +   + D++        N  +   +A+R+  +  Q  GG+ +L+ ++  
Sbjct: 155 SLVDTFMPAGLKHALVTDISRDGTMTGANTALYCELAERFNEVQWQASGGVATLDDVKAV 214

Query: 94  VKAGVSYVIIGTKAVKDPAFVAEACRAFP 122
             +G S +IIG   +       EA   +P
Sbjct: 215 KTSGASGIIIGKALLTGVFSAKEAIACWP 243