Pairwise Alignments

Query, 245 a.a., 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) from Pseudomonas simiae WCS417

Subject, 241 a.a., 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase from Methanococcus maripaludis S2

 Score =  179 bits (454), Expect = 5e-50
 Identities = 95/237 (40%), Positives = 143/237 (60%), Gaps = 5/237 (2%)

Query: 1   MLIIPAIDLKDGACVRLRQGRMEDSTVFSDDPVSMAAKWVEGGCRRLHLVDLNGAFEGQP 60
           +L+IPA+D+K+  CV+L QG  +   V  D+P  +A KWV  G   LHLVDL+GA +G+ 
Sbjct: 1   VLVIPAVDMKNKKCVQLIQGNPDKKHVELDNPPEIAKKWVNEGAEMLHLVDLDGALDGKR 60

Query: 61  VNGEVVTAIAKRYPSLPIQIGGGIRSLETIEHYVKAGVSYVIIGTKAVKDPAFVAEACRA 120
           VN E +  I K+   +P+QIGGGIRS+E  E+ V+ G   VIIGT AV++P  + E  + 
Sbjct: 61  VNDEFIEEIIKK-SGVPVQIGGGIRSIEDAEYLVEKGAKKVIIGTIAVENPEIIKELSKR 119

Query: 121 FPG-KVIVGLDAKDGFVATDGWAEISTVQVIDLAKQFEADGVSAIVYTDIAKDGMMQGCN 179
               K++V LDAKDG V   GW E +    + + K  E  G  +I++T++  +G++ G N
Sbjct: 120 IGSEKIMVSLDAKDGKVVIKGWKEKTKYTPVQIGKILEEMGAGSILFTNVDSEGLLNGIN 179

Query: 180 VPFTAALAAATKIPVIASGGIHNLGDIKSLLDAKAPGIIGAITGRAIYEGTLDVAEA 236
           +  T  L    KIP++ASGG+  + D   LL  K  G+ G + G AIY+  +++ +A
Sbjct: 180 IEPTKELVDNLKIPIVASGGVTTIDD---LLKLKEIGVYGVVVGSAIYKNMINLKDA 233



 Score = 26.2 bits (56), Expect = 6e-04
 Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 6/118 (5%)

Query: 3   IIPAIDLKDGACVRLRQGRMEDSTVFSDDPVSMAAKWVEGGCRRLHLVDLNGAFEGQPVN 62
           I+ ++D KDG  V       ++ T ++   +    + +  G      VD  G   G  +N
Sbjct: 125 IMVSLDAKDGKVVIKG---WKEKTKYTPVQIGKILEEMGAGSILFTNVDSEGLLNG--IN 179

Query: 63  GEVVTAIAKRYPSLPIQIGGGIRSLETIEHYVKAGVSYVIIGTKAVKDPAFVAEACRA 120
            E    +      +PI   GG+ +++ +    + GV  V++G+   K+   + +A  A
Sbjct: 180 IEPTKELVDNL-KIPIVASGGVTTIDDLLKLKEIGVYGVVVGSAIYKNMINLKDAIEA 236