Pairwise Alignments

Query, 438 a.a., porin from Pseudomonas simiae WCS417

Subject, 412 a.a., Tricarboxylate porin OpdH from Pseudomonas fluorescens FW300-N2E2

 Score =  270 bits (689), Expect = 8e-77
 Identities = 161/421 (38%), Positives = 232/421 (55%), Gaps = 39/421 (9%)

Query: 20  AASGFIDDSKASLDLRNFYYNQDTRNAKAASD-KEWGQAFMFNYQSGFTEGTVGLGLDLQ 78
           A + FI DSK SL+ RNFY+N+D R   A    KEW Q F+   +SG+T GTVG GLD  
Sbjct: 27  AQADFIADSKGSLEARNFYFNRDFRQEGARDKAKEWAQGFLLRMESGYTAGTVGFGLDAL 86

Query: 79  EWYGLRLDASGRAGKAGADNTPGSVFPLDDGKAVHDFSKTGVTGKLRIAQTQLKAGNLMP 138
              G +LD+ G  G AG +  P        G +   + + G+T K+R++ + LK G L  
Sbjct: 87  GMAGFKLDSGG--GTAGTNLLPAD----RSGGSQDRYGELGLTAKVRVSNSTLKLGTLQI 140

Query: 139 KLPVLTTEDGRLLPQTFRGYQVESKDFRDVNLIAGKIEQVMDRNSSNGQGLSIAGANDPV 198
           K P +++ D RLLP TF+G  +  ++   + L AG++ Q+   +S++ Q ++        
Sbjct: 141 KDPAVSSNDTRLLPGTFKGGLLSVQEIDRLKLTAGQLTQINFVDSTDYQDMTANRI---- 196

Query: 199 KGKASNQFYYGGVDYAVSKRLQVQYYYASLENFYQQHFLGLVHNWQLPVGQ-LKSDLRYF 257
            G +S++F + G DY     L  QY Y+ LE+ YQQ++LG VH   L  GQ  KSD+RY 
Sbjct: 197 -GGSSDKFQFAGADYQFLPNLTAQYRYSLLEDIYQQNYLGFVHTLDLGAGQSFKSDVRYS 255

Query: 258 YSTADGKNGSVAGRGEGYVSSGYYGPGVNAGKVDNRLWSAMFTYALSGHSLSLGYQKTTG 317
            ST DG                      +  ++DN+ + AMFTY+L+GH+L LGYQ+ +G
Sbjct: 256 RSTEDG----------------------SFRELDNQAFGAMFTYSLAGHALGLGYQRMSG 293

Query: 318 QSDFPHINQGQGRSLYLITNSQSLKFVNAGEQATVGSYAYDFAGLGVPGLRSSVTYIHGS 377
              FP+I +      YL+   Q   F N  E++    Y Y+FA +GVPGL     YI G 
Sbjct: 294 DDPFPYIGRSDP---YLVNFVQIGDFANIDERSWQARYDYNFAAIGVPGLTFMTRYITGD 350

Query: 378 HI-RTVGRDNSEWERDLRLDYVIPTGTLKGLGFTWRSAVLRGNDTADKDETRLIVSYSIP 436
           ++ R+   +  EWER+  + YV+  GTLKGLG  WR+A +R N   D DE RLIVSY++ 
Sbjct: 351 NVQRSAPGEGKEWERNTDIAYVVQDGTLKGLGLKWRNATVRSNFGNDLDENRLIVSYTMA 410

Query: 437 L 437
           L
Sbjct: 411 L 411