Pairwise Alignments

Query, 331 a.a., protease from Pseudomonas simiae WCS417

Subject, 333 a.a., peptidase, U32 family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  368 bits (944), Expect = e-106
 Identities = 185/333 (55%), Positives = 233/333 (69%), Gaps = 2/333 (0%)

Query: 1   MQLVCPAGNLPALKAAVRQGADAVYVGFRDDTNARHFAGLNMDDKQFDAAVAHIRQHQRK 60
           M+L+CPAGNL +LK+A++ GADAVY+G +DDTNAR FAGLN    +   A     Q  +K
Sbjct: 1   MELLCPAGNLASLKSALQAGADAVYLGLKDDTNARSFAGLNFTPAKLQEAAELTHQRGKK 60

Query: 61  LYVAVNTYPQPKIWPRWQRAVDRAADHGVDALIAGDPGVLGYAARRHPHMALHLSVQGSA 120
           +++ +NT+P+P    RW +A+D AA  GVDALI  D  +L YA R++PH+ LHLSVQ SA
Sbjct: 61  IFLTLNTFPKPNEEHRWYQAIDLAAKIGVDALIVADLSLLDYAHRQYPHIPLHLSVQASA 120

Query: 121 THAAALKFYVEHYGIRRAVLPRVLSLAQVRQVAASGTVPIEVFGFGSLCIMAEGRCHLSS 180
           T+  AL FY E + + R VLPRVLS+ QVR +A    V +EVF FGSLCIMAEGRCHLSS
Sbjct: 121 TNLGALSFYKEAFNVSRVVLPRVLSMKQVRDLAKVSPVDLEVFAFGSLCIMAEGRCHLSS 180

Query: 181 YITGESPNLCGVCSPAKAVRWSDDADGLSARLSDVLIDRYTPDEPAGYPTLCKGRFLV-- 238
           Y+TG+SPN  G CSPAK VRW +        L++VLID+   DE  GYP +CKGR+L   
Sbjct: 181 YVTGQSPNTGGSCSPAKHVRWQEQGQDRLTWLNEVLIDKSGLDEQMGYPVVCKGRYLTQE 240

Query: 239 GGKRFHALEEPTSLDTLDLLPELSAIGVEAVKIEGRQRSPAYVEQVTRVWRAALDAHRAN 298
             K  + LE PTSL+TL LLPEL+  G+ ++KIEGRQRSPAYVEQVT+VWR A+D +  +
Sbjct: 241 DDKPQYLLESPTSLNTLSLLPELAKAGIVSLKIEGRQRSPAYVEQVTKVWRQAIDTYLNH 300

Query: 299 PASFVVKDPWRQVLAGLSEGSQTTLGAYHRAWQ 331
           P  F  +  W Q LA +SEG  TTLGAY R WQ
Sbjct: 301 PDKFQTQAHWEQALAKVSEGQITTLGAYERNWQ 333