Pairwise Alignments

Query, 662 a.a., ribonucleoside-triphosphate reductase from Pseudomonas simiae WCS417

Subject, 705 a.a., anaerobic ribonucleoside triphosphate reductase (RefSeq) from Shewanella amazonensis SB2B

 Score =  118 bits (296), Expect = 8e-31
 Identities = 148/633 (23%), Positives = 264/633 (41%), Gaps = 76/633 (12%)

Query: 15  KRDGSLAPFDAEKIRQALIAAGTATAEFQANDADLLLGAVLARLRGIEQLDVELIQDSVE 74
           KRDG  A FD  ++R A+IAA  A      + A  +   V A +   +++ +  +QD+VE
Sbjct: 6   KRDGCRAAFDETRLRDAVIAAQGAAGVEDKDYAATVASVVAAEVAQRDEVAIHELQDAVE 65

Query: 75  RVLMDAGYFQSMRAYIVY-------REQHGRMRRDRKTLVEV--ATSMNEYLDREDWRVQ 125
             LM   Y +  R YI Y       RE   R+  + ++LVE   A  ++E  +++   + 
Sbjct: 66  NCLMSGPYKEVARHYIEYRHDRDVCREATSRLNLEIRSLVEQTNAALLHENANKDSKVIP 125

Query: 126 ANANQGYSLGGLVLNVAGKVTANYWLDEVYSEQIGRAHREADLHIHDLDMLAGY----CA 181
              +           +AG V  +Y    +  + +  AH   ++H HDLD    +    C 
Sbjct: 126 TQRDL----------LAGIVARHYAKRHILPKAVVAAHEAGEIHYHDLDYSPFFPMFNCM 175

Query: 182 GWSLRSLLHEGLNGVPGRVEAGPPKHLSSALGQMVNFLGTLQNEWAGAQAFSSFDTYLAP 241
              L  +L +G     G  E   PK +S+A       +  + +   G    +  D  L+P
Sbjct: 176 LIDLAGMLTKGFK--MGNAEIETPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLSP 233

Query: 242 YVRK--DQLSYPQVRQAVQEFIYNLNVPSRWGTQTPFTNLTFDWVCPEDLREQVPVIGGE 299
           YV K  D+     +   + + +      +       F +L ++         Q P +   
Sbjct: 234 YVAKSYDKHYQTALHWGITDAVAYARALTEKECHDAFQSLEYEVNTLHTANGQTPFV--- 290

Query: 300 EMPFAYG-DLQAEMELINRAYIEVMQAGDAKGR-VFTFPIPTY----NITHDFPWDSDNA 353
              F +G     E  LI ++ ++V  AG  K R    FP   +     I H     + + 
Sbjct: 291 --TFGFGLGTSWESRLIQQSILKVRMAGLGKNRKTAVFPKLVFAIRDGINHKQGDCNYDI 348

Query: 354 DRLFEMTARYGLPYFQNFLNSDMQPNQVRS----MCCRLQLDVRELLKRGGGLFGSAEQT 409
            RL    A   +  + + LN +       S    M CR  L V E   + G L    E  
Sbjct: 349 KRLALKCATERM--YPDILNYEQVVRVTGSFKTPMGCRSFLGVYE---KDGEL--EHEGR 401

Query: 410 GSLGVVTINCARLGYLFKGDTSGLLQRLDSLMEMAMESLE--------VKRKV------- 454
            +LGVV++N  R+     GD S     L+  +++A ++L+        VK +V       
Sbjct: 402 NNLGVVSLNLPRIAIEAGGDESRFYSLLEERLQVARQALDSRIERLKGVKARVAPILYME 461

Query: 455 ----IQHHMDAGLYPYTKRYLGTLRNHFSTIGLNGMHEMLRNFSADEEGMH-TEQGRAFA 509
               ++   D  + P  K    ++     ++G  G+HE +      +E ++ +E+ R  A
Sbjct: 462 GACGVRLRPDDDIEPIFKNGRASI-----SLGYIGLHETVNALYGTQEHVYDSEELRQKA 516

Query: 510 LKLLDHVRATLLRFQEDTGHLYNLEATPAEGTTYRFAKEDRKRYPNILQAGSDIAPYYTN 569
           + ++  ++    +++++TG+ ++L +TP+E    RFAK D K +  ++Q  +D   YYTN
Sbjct: 517 VAIVARLKQATEQWKQETGYGFSLYSTPSESLCSRFAKLDIKAF-GLIQGVTD-KGYYTN 574

Query: 570 SSQLPVGFTQDPFEALELQDELQCKYTGGTVLH 602
           S  L V     PF+ ++ +       +GG + +
Sbjct: 575 SFHLDVEKKVSPFDKIDFEMPYPELASGGFICY 607