Pairwise Alignments

Query, 288 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 262 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  157 bits (398), Expect = 2e-43
 Identities = 81/224 (36%), Positives = 123/224 (54%), Gaps = 1/224 (0%)

Query: 39  APHSHRKGQLMYTLRGVIHCQIEAGIWIVPPQCALWIPGGLPHAARGSGEAEVYCLLIDP 98
           APH H   QL+Y   GV+    E   WI+ PQ ALW+P  LPH  +  G+  +  +   P
Sbjct: 34  APHWHHAAQLIYAESGVMELSCEESFWIISPQQALWMPAELPHRLKARGQVSLRSVYFQP 93

Query: 99  DAAGA-LPAQCCTLSVSGLLHELISKAVSFPQLYDEDGAQGRLIRTLLDELAQAPIEDLH 157
           DA       Q  +L VS LL EL+  A+           +  L++ L+ E+  A    L 
Sbjct: 94  DALPERFSKQPQSLVVSPLLRELMKSAMPVTSSSQPSSREVHLMQLLMSEIGWAQEIPLK 153

Query: 158 LPMPRDPRLRRLADSLLADPGDKATLGQWAMRIGMSERSMTRLLLEEFGLSFGRWRRQLH 217
           LPMP+D RL+++   LLADPG+  TL QW   +G S R+++RL   + G SF  WR+Q  
Sbjct: 154 LPMPKDNRLQKICLGLLADPGNDCTLSQWGEIVGASPRTLSRLFQTQLGTSFAIWRQQAR 213

Query: 218 VILSLQRLARGDSVQRVALDLGYENASGFITMFRKAVGQPPARY 261
           +  ++ RL  G+ + RVA+++GY++A  F + F+K +G  P+ +
Sbjct: 214 IFAAIPRLNLGEPIVRVAMEMGYDSAGAFASAFKKMMGVTPSEF 257