Pairwise Alignments

Query, 339 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  154 bits (389), Expect = 3e-42
 Identities = 97/293 (33%), Positives = 148/293 (50%), Gaps = 4/293 (1%)

Query: 1   MTDLKDVARLAGVSRATAARTFASPDQVRPTTREQVFAAARELGFRPNLLGRQLRLQTTQ 60
           M  +KDVA+LAGVS AT +R   +P++V  +TR++V  A  E G+ PN L R LR   ++
Sbjct: 1   MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESK 60

Query: 61  LIGVVVPNLLNPVFAEQFQAMERAARARGYSLLLATTDYSSERECSVVEELLRQRVDGLV 120
            I  +VP++ +P F+E  + +E AA   GY +LL  +     RE S V  +  ++ DG++
Sbjct: 61  TIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGML 120

Query: 121 LTVTDAESNSVLSSLNTEQTPFVLAYHQPSNPNYSAVSVDNRAGMALATRYLLDAGHRRI 180
           L  TD   + V         P V+A           V +DN      A  YL   GH+RI
Sbjct: 121 LLGTDLPFD-VSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRI 179

Query: 181 SMVAGPALQSDRARLRYAGYCDAMLE--YSLEPRSVIEMPAHTQAEFAAIQPVLQGADAP 238
           + ++GP   +   + R+ GY  A+     ++ P          +A   A++ +L   + P
Sbjct: 180 AQISGPQ-HAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQP 238

Query: 239 TALVCSNDFLAISLIAELRRNAWNVPEQLSVMGFDGISLGTQMHPTLCSVVQP 291
           TA+ C ND +AI  I E +R    VP+ LSV+GFD I       P L ++ QP
Sbjct: 239 TAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQP 291