Pairwise Alignments

Query, 339 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (357), Expect = 2e-38
 Identities = 99/313 (31%), Positives = 150/313 (47%), Gaps = 16/313 (5%)

Query: 4   LKDVARLAGVSRATAARTFASPDQVRPTTREQVFAAARELGFRPNLLGRQLRLQTTQLIG 63
           L+DVA   GV++ T +R   SPD V   TRE++  A   LG+  N     L   +++ IG
Sbjct: 9   LQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSKAIG 68

Query: 64  VVVPNLLNPVFAEQFQAMERAARARGYSLLLATTDYSSERECSVVEELLRQRVDGLVLTV 123
           +++P+L N +FA   Q +E   +A GY  LLA   Y  E E   +  LL  +VDGL+LT 
Sbjct: 69  ILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLILTE 128

Query: 124 TDAESNSVLSSLNTEQTPFVLAYHQPSNPNYSAVSVDNRAGMALATRYLLDAGHRRISMV 183
           +   +   L  + +   P V     P+NP   AV +D+      A + ++ AG R I+  
Sbjct: 129 SH-HTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSIAYF 187

Query: 184 AGPALQSDRARLRYAGYCDAMLEYSLEPRSVI-------EMPAHTQAEFAAIQPVLQGAD 236
              A    R +LR  GY  AM E  L  + V+        + A    E  A  P L G  
Sbjct: 188 G--ARLDTRTKLRMQGYDQAMQEAGLPIKHVLTGSHSSFSLAAQLLDEAFARYPDLDG-- 243

Query: 237 APTALVCSNDFLAISLIAELRRNAWNVPEQLSVMGFDGISLGTQMHPTLCSVVQPIALLA 296
               + C+ND +AI  +   ++    VPEQLSV+G++ + +G  + P L SV  P   + 
Sbjct: 244 ----VFCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIG 299

Query: 297 STVIDQLLAQIAG 309
               + L+A + G
Sbjct: 300 EKSAELLIAALKG 312