Pairwise Alignments

Query, 339 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 337 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

 Score =  153 bits (387), Expect = 5e-42
 Identities = 110/314 (35%), Positives = 164/314 (52%), Gaps = 16/314 (5%)

Query: 4   LKDVARLAGVSRATAARTFASPDQVRPTTREQVFAAARELGFRPNLLGRQLRLQTTQLIG 63
           LKDVA  AG+S+A  +R       + P T +++  A + L +R N L R+L    ++ IG
Sbjct: 7   LKDVANHAGLSKAAVSRYLNRSISLPPETAQRIDLAIKALDYRGNSLARRLSKGGSETIG 66

Query: 64  VVVPNLLNPVFAEQFQAMERAARARGYSLLLATTDYSSERECSVVEELLRQRVDGLVLTV 123
           +V+P++ NP FAE   A E  A A GY+L+L  T    ERE + V  L  + VDGL+L  
Sbjct: 67  LVLPDIANPFFAELADAAEEEASAHGYNLVLCVTRNLLERESTFVRWLDSRNVDGLLLVS 126

Query: 124 TDAESNSVLSSLNTEQTPFVLAYHQPSNPNYSAVSVDNRAGMALATRYLLDAGHRRISMV 183
              +  ++ S L + +   +L    P   +   V  DN  G  LAT YL+  GHRRI+ V
Sbjct: 127 NRPDDGTLASQLMSYRNIILLDEDVPGT-SQPKVFADNHQGGRLATDYLIRHGHRRIAHV 185

Query: 184 AGP-ALQSDRARLRYAGYCDAMLEYSLEPRSVIEMPAHT-----QAEFA--AIQPVLQGA 235
           +GP AL S  AR RYAGY +A     L   S+ E+P +        EF   A   +L   
Sbjct: 186 SGPSALMS--ARERYAGYREA-----LALASIAEVPEYLCFGDYSREFGRIATAQLLTLP 238

Query: 236 DAPTALVCSNDFLAISLIAELRRNAWNVPEQLSVMGFDGISLGTQMHPTLCSVVQPIALL 295
           D P A+  ++DF+A+ ++  LR    +VP  +S++GFD     + + P LC++ Q    L
Sbjct: 239 DPPEAIFAASDFIALGVLDVLRERTISVPGAMSLVGFDDAVYASLLTPPLCTIRQSSREL 298

Query: 296 ASTVIDQLLAQIAG 309
               + QLL ++ G
Sbjct: 299 GRLGVAQLLQRMTG 312