Pairwise Alignments

Query, 334 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 15/248 (6%)

Query: 49  TGVQVPLDNKNSGQSLAQLVAEKAAPVADV-VYYGVTFGLQAQKAEVVDTYK-PKAWDQI 106
           TG+++   + +SG++L++L AE++ P ADV +  G+   + AQ+  +++ YK P A D  
Sbjct: 57  TGIKMEYVSLSSGEALSRLKAEQSNPSADVWLGGGIDAFISAQQDGLLEAYKSPNAKDID 116

Query: 107 PAGLKDPAGHWFAIHSGTLGIMVNVDALG--GLPVPHSWADLLKPEYKGMVGYLDPSSAF 164
           P  +++  G+W  +   T+GI+ N D L   GLP P +W DL+  +YKG +   +P+ + 
Sbjct: 117 PLFVEED-GYWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLITDDYKGELIASNPTVSG 175

Query: 165 VGYVSAVAINRAMGGDLDNFAPAIDYFQKLAKNTPIVPKQTAYAR--VLSGELPILVDYD 222
             Y +   I +  G D        +Y  K  +NTP + K+ +     V +GE    V  D
Sbjct: 176 TAYFTICGILQMYGED-----EGWNYLDKFYQNTPFLTKRGSGPGNLVTAGEYAYGVAPD 230

Query: 223 FNAYRARYKDKANVAFVIPEEGSISVPYVMSLVANAPHRANAQKVLDFVLSDEGQALWAK 282
              +     D       +     I  P  +S+V+ A H  NA+  +D+ LS EGQ +  +
Sbjct: 231 --PHTTVIADSELPVKSVFLNKVIWWPSPVSIVSGAKHPENAKIFVDWCLSKEGQEVLMQ 288

Query: 283 AYLR-PVR 289
           A  R PVR
Sbjct: 289 ASPRVPVR 296