Pairwise Alignments

Query, 264 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 266 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score = 96.3 bits (238), Expect = 6e-25
 Identities = 77/267 (28%), Positives = 129/267 (48%), Gaps = 24/267 (8%)

Query: 1   MKRSSLFVLQLLFTLLVCAFMLVPVLMSLLAGLTRNFFVGLSSGLTFDWLIQVWQAYSPT 60
           MK +       LF L V    ++ ++MS++  ++   F          + I+        
Sbjct: 1   MKNNDFLKFFSLFALSVFILFILMIVMSIVTNISFETFYDSLFSKEIQFAIK-------- 52

Query: 61  VWLSLQLALACAVGVCVIGVPAAYALVRMNNRFSRAFEELMVLPVAMPGLASALALLLTY 120
             LSL+ A    +   ++GVPAAYAL R N +     + ++ LPV +P L +  ALL+ +
Sbjct: 53  --LSLETASIATILGTLLGVPAAYALARYNFKGKDIVDSIVELPVILPPLITGFALLVFF 110

Query: 121 GQ--FGSFRS--------SWLFILVGHVLFTLPFLVRPVMAVMQRQQLPLLEEAAASLGA 170
           G   FG F +        ++   +V       PF++R   +V +       E  A SLG+
Sbjct: 111 GNTVFGKFITENIIEILFTYKGTIVAQFFVATPFIIRTSKSVFECID-EKYELIAQSLGS 169

Query: 171 GPIKRFFSVVVPNCRAGILAGVLMVVTLSLGEFNLTWML--HTPM-TKTLPVGLADSYAS 227
              + F  VV+P  + GI+AG ++    S+GEF  T ML   T M T+TLP+ +  + + 
Sbjct: 170 KKYESFLDVVIPMAKNGIIAGAILAWARSIGEFGATMMLAGATKMKTETLPIAVFLNISL 229

Query: 228 ARLEIASAYTLIFLLMIVPLLIALQAI 254
             LE A A +LIFLL+   +L+ ++++
Sbjct: 230 GDLEKALAVSLIFLLVATLVLVIIRSV 256