Pairwise Alignments

Query, 380 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1039 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 77.0 bits (188), Expect = 2e-18
 Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 24/261 (9%)

Query: 131 LQEKTDTELALQHAQAELHEAYAISQSRARFAEQMVAIVSHDLKNPLTAIRMASDFLARG 190
           + E+  TEL L  A+ +     A++ +RA+  ++ +A +SH+++ PL  I      LA  
Sbjct: 635 VDERKRTELELVEAKTK-----AVAANRAK--DEFLANMSHEIRTPLNGIFGMLRMLADA 687

Query: 191 ERTTKERQLLGHIGQSSERAQRMIADLLDFTQARVGQGITIKAAPLDLHEVIHRAVDELR 250
               ++++L     +S  R   ++ D+LD ++   G+ + I + P DL   I R V EL 
Sbjct: 688 SLAPRQQELAEMAMRSCRRLADLLTDVLDISRIDAGK-LEIVSIPFDLSRSI-RQVRELF 745

Query: 251 VAFPKASLVHLADGNGDASL------DADRVQQIIGNLVANSVAYGDPQRPITITSRLGD 304
           +     + V L   + DA++      DA R+QQ++ NL+ N+  + +          L  
Sbjct: 746 IPSAMQAGVSL-HVHIDAAIPSRVVGDASRLQQVLTNLLGNAFKFTEKGSVTLRAEHLSP 804

Query: 305 ---NRCEV--SVHNYGRVIPKALLAELFEPMTRGTDQ-GSDVRSVGLGLYIVRELARVHG 358
              N C V  SV + G  IP     +LF P T+  +      +  GLGL I R + RV G
Sbjct: 805 VLANSCRVLFSVEDTGCGIPDEKHGKLFTPFTQACEGFKRSHQGAGLGLSICRRIIRVMG 864

Query: 359 GDVAVSSCVTGGTT--FTVNF 377
           G +A  S    GTT  FT+NF
Sbjct: 865 GHLAFESEAGTGTTVYFTLNF 885



 Score = 30.8 bits (68), Expect = 2e-04
 Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 19/130 (14%)

Query: 5   LFDSAACALAVTAEDGTILQVNARFSEWLGFSTTELCGKRFQDLLTMGGQIFHQTHLAPM 64
           +FD +   L     DG I+ VN RF+E  G S  ++ G  +           +Q H A M
Sbjct: 406 VFDQSPLGLVQYDGDGIIIDVNERFAELCGASRGQIIGFNY----------INQMHDARM 455

Query: 65  L-----RMRGSV---TEVKLDMLHRDGHKVTVLLNGIKREQTDAVVHDLALFGTTDRDKY 116
           L      +RG +     V    L +    +  L  G+K    D  +    +   +DR K 
Sbjct: 456 LGAVLASLRGGIGGFEGVYTSPLGKKTAFIRCLFKGVKAPAGDVFIGIGIIEDVSDR-KQ 514

Query: 117 ERELLNARKL 126
             E L  R+L
Sbjct: 515 AEEALREREL 524