Pairwise Alignments

Query, 271 a.a., sigma factor sigB regulation protein rsbQ from Pseudomonas simiae WCS417

Subject, 303 a.a., 2-hydroxy-6-oxohepta-24-dienoate hydrolase from Synechococcus elongatus PCC 7942

 Score = 50.8 bits (120), Expect = 3e-11
 Identities = 60/259 (23%), Positives = 99/259 (38%), Gaps = 16/259 (6%)

Query: 12  MGNGSSTLVFSHGFGCNQAMWNYLAPQFSERFRVVMYDLVGAGLSDLSAFDKAKYSSLDG 71
           +G G   L+  HGF  +   +  L PQ +E+  V   D +G G ++     +    S D 
Sbjct: 50  LGQGDRPLLCLHGFDSSVFEFRRLLPQLAEQHSVRALDCLGFGFTERP---EGIEISPDT 106

Query: 72  YARDLNEIIDAFAVGPVILVSHSVSAMISTLADRQAPNRIAAHVMIGPSPRYIDADGYVG 131
             + L     A+   P++LV  S+   I+       P  +A  ++I  +   I    ++G
Sbjct: 107 IRQHLWGCWQAWYQKPIVLVGASMGGAIAIDFALNYPEAVAGLILIDSAG--IAPGPWIG 164

Query: 132 GFKRGDIQDLLDTLDSNYLGWSSAMAPVIMGAPGQPAL----SQELTDSFCRTEP---EI 184
            F    +   LD    ++LG       +   A   P        E   +    +P   E 
Sbjct: 165 RF----LPSPLDGWAVDFLGRPDVRRRISERAYHDPQRWVTPDAETCAALHLQQPGWREG 220

Query: 185 AKQFARVTFMSDNRQDVIGLATPVLVLQSSDDLIAPVAVGEYLHSVLPNSTYCLVDNVGH 244
            ++F R       R  +  L  P  +L    D I           +LP S    +D+ GH
Sbjct: 221 LRRFTRSGGYGSMRSRLPELRQPTQLLWGRQDQILGTKDAAVFQRLLPQSELVWIDDCGH 280

Query: 245 CPHMSAPHACATAMHSFLA 263
            PH+  P A A A+ +F+A
Sbjct: 281 VPHLEQPRATAEAIATFVA 299