Pairwise Alignments

Query, 367 a.a., recombinase RecF from Pseudomonas simiae WCS417

Subject, 387 a.a., recombination protein F from Synechococcus elongatus PCC 7942

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 96/359 (26%), Positives = 158/359 (44%), Gaps = 22/359 (6%)

Query: 1   MSLSRVSVTAVRNLHPVTLSPSPRINILHGANGSGKTSVLEAIHLLGLARSFRSARLLPV 60
           M L  + +   RN    T+       IL G N  GKT++LEA+ L    RS R +R   +
Sbjct: 1   MFLHSLHLQHFRNYRDQTVQFQAPKTILLGENAQGKTNLLEAVELFSTLRSHRVSRDRDL 60

Query: 61  IQYEQLACTVFGQVELAEGGHSSLGISRDRGGEFQIRIDGQNARSAAQLAEILPLQLINP 120
           +Q    +  +   VE  + G   L I   + G  +++ DG+  R    L   L     + 
Sbjct: 61  VQTGAESALLTAVVE-RDSGEQQLQIQLQQQGRRRVQRDGEVLRRQLDLLGSLCSVQFSS 119

Query: 121 DSFRLLEGAPKIRRQFLDWGVFHVEPRFMATWQRLQKALRQRNSWLRHG-TLDAASQAAW 179
               L+ G P+ RR +LD  +  ++P +    Q+  + LRQRN+ LR   +LD A  A  
Sbjct: 120 LDLDLVRGGPQQRRDWLDRLLIQLQPIYAHLQQQYGRVLRQRNALLRRAESLDLALLAPL 179

Query: 180 DRELCLASDEIDEYRRAYIKALKPVFEQTLSELL-ELEGLTLSYYRG------------W 226
           + +L      I   R   I+ L P+      E+  + E L ++Y               W
Sbjct: 180 NWQLAQLGVHIMRRRSRAIQRLVPLAAHWHREISGQREQLIVAYQPSVLAPDDTDEAIAW 239

Query: 227 DKERELSAVLATSLQRDQQIGHTQA--GPQRADLRLRLGAHNAADILSRGQQKLVVCALR 284
            +ER L+ + A   +R  ++G   +  GP R DL L +    A    S+GQQ+ +V +L+
Sbjct: 240 -QERMLAQIEA---RRAAELGQRTSLVGPHRDDLNLSINGTEARLQASQGQQRTLVLSLK 295

Query: 285 IAQGHLVSQARRGQCIYLVDDLPSELDEQHRRALCRLLEELRCQVFITCVDHELLREGW 343
           +A+  L+        + L+DD+ +ELD + ++ L   +   R Q  IT        + W
Sbjct: 296 LAELELIEAVLGEPPLLLLDDVLAELDLRRQQQLLEAIAN-RFQTLITTTHLSAFDQSW 353