Pairwise Alignments

Query, 367 a.a., recombinase RecF from Pseudomonas simiae WCS417

Subject, 365 a.a., DNA replication and repair protein RecF from Phaeobacter inhibens DSM 17395

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 102/364 (28%), Positives = 161/364 (44%), Gaps = 16/364 (4%)

Query: 1   MSLSRVSVTAVRNLHPVTLSPSPRINILHGANGSGKTSVLEAIHLLGLARSFRSARLLPV 60
           ++L+ ++++  R+     L    R   +HGANG+GKT++LEA+ L    R  R A    +
Sbjct: 2   LALTTLTLSHFRSHLRADLHLDGRPVAIHGANGAGKTNILEAVSLFSPGRGLRRASAADM 61

Query: 61  IQY-EQLACTVFGQVELAEGGHSSLGISRDRGGEFQIRIDGQNARSAAQLAEILPLQLIN 119
            +  E L   + GQ+  A   +  +    + G   Q++ID + A S   L +I  +  + 
Sbjct: 62  ARRPEALGWKLKGQLTAARQSY-EVETWSEAGKARQVKIDNK-AASQIDLGQICRVVWLI 119

Query: 120 PDSFRLLEGAPKIRRQFLDWGVFHVEPRFMATWQRLQKALRQRNSWLRHGTLDAASQAAW 179
           P   RL   A + RR+FLD  V   +P         +KA+R+RN  L+    DAA     
Sbjct: 120 PAMDRLWIEAAEGRRRFLDRIVLSFDPGHAEATLLYEKAMRERNRLLKEQIRDAAWYRVL 179

Query: 180 DRELCLASDEIDEYRRAYIKALKPVFE--QTLSELLELEGLTLSYYRGWDKERELSAVLA 237
           + ++  +   I   R A +  L+   E  +T     ELE L  S     D   +L     
Sbjct: 180 ETQMAESGHRIHAARTAAVDRLRMAQEAAETAFPAAELE-LIQSDGGLPDTAADLQEAFE 238

Query: 238 TSLQRDQQIGHTQAGPQRADLRLRLGAHNAADILSR----GQQKLVVCALRIAQGHLVSQ 293
               RD   G T  GP R DL   LG + A  + +R    G+QK ++ +L +A    +  
Sbjct: 239 EGRFRDLAAGRTLLGPHRTDL---LGTYAAKGVPARDCSTGEQKALLVSLILANARALIA 295

Query: 294 ARRGQCIYLVDDLPSELDEQHRRALCRLLEELRCQVFITCVDHELLREGWQTETPVALFH 353
                 I L+D++ + LD   R AL + +  L  Q ++T    EL  E    E    +F 
Sbjct: 296 EGGAPPILLLDEVSAHLDVIRRAALYQEIVTLGAQAWMTGTGPELFDE---FEGRAQMFT 352

Query: 354 VEQG 357
           VE G
Sbjct: 353 VEDG 356