Pairwise Alignments

Query, 367 a.a., recombinase RecF from Pseudomonas simiae WCS417

Subject, 385 a.a., DNA replication and repair protein RecF (single-strand DNA binding protein) from Mycobacterium tuberculosis H37Rv

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 94/352 (26%), Positives = 147/352 (41%), Gaps = 30/352 (8%)

Query: 17  VTLSPSPRINILHGANGSGKTSVLEAIHLLGLARSFRSARLLPVIQYEQLACTVFGQVEL 76
           V L   P   +  G NG GKT+++EA+       S R +  LP+I+       V   + +
Sbjct: 17  VDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPLIRVGTDRA-VISTIVV 75

Query: 77  AEGGHSSLGISRDRGGEFQIRIDGQNARSAAQLAEILPLQLINPDSFRLLEGAPKIRRQF 136
            +G   ++ +    G   + R++  + RS   +  +L   L  P+   L+ G P  RR++
Sbjct: 76  NDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPEDLGLVRGDPADRRRY 135

Query: 137 LDWGVFHVEPRFMATWQRLQKALRQRNSWLR----------HGTLDAASQAAWDRELCLA 186
           LD       P   A     ++ LRQR + L+           G  D      WD  L   
Sbjct: 136 LDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVFDTLE--VWDSRLAEH 193

Query: 187 SDEIDEYRRAYIKALKPVFEQTLSELL-ELEGLTLSYYRGWDK---------ERELSA-- 234
             E+   R   +  L P  ++    L  E    ++ Y    D          +R+L A  
Sbjct: 194 GAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPSEQSDIDRQLLAAR 253

Query: 235 -VLATSLQRDQQI--GHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLV 291
            + A + +RD ++  G    GP R DL LRLG   A    S G+   +  ALR+A   L+
Sbjct: 254 LLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWSLAVALRLAAYQLL 313

Query: 292 SQARRGQCIYLVDDLPSELDEQHRRALCRLLEELRCQVFITCVDHELLREGW 343
            +   G+ + L+DD+ +ELD   RRAL    E    QV +T    E +  GW
Sbjct: 314 -RVDGGEPVLLLDDVFAELDVMRRRALATAAESAE-QVLVTAAVLEDIPAGW 363