Pairwise Alignments

Query, 491 a.a., type VI secretion protein from Pseudomonas simiae WCS417

Subject, 492 a.a., type VI secretion system contractile sheath large subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  715 bits (1845), Expect = 0.0
 Identities = 335/490 (68%), Positives = 414/490 (84%)

Query: 1   MTTQQHSLPAQTADQYSILDNIVAQTLLSADDEAYGIAKRGVSAFIEELIKPQNRGEPVK 60
           M+T +  L      Q S+LD I+AQT ++  +E Y IAK+GV+AFIE L+  Q+  EPV 
Sbjct: 2   MSTTEKVLERPQLAQGSLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVN 61

Query: 61  KRLVDRMIAEIDTKLSLQMDEILHHPDFQALEASWKGLQLLVDRTNFRENIKIELLNISR 120
           K LVD+M+ E+D K+S QMDEILH+  FQA+E++W+GL+L VDRT+FREN K+E+L++++
Sbjct: 62  KSLVDQMLVELDKKISAQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTK 121

Query: 121 QDLLEDFEDSPELTQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYASSV 180
            +LLEDFE +PE  QSGLYKH+YSA YGQFGG+PVGAII NY  +PS PD+KL+QY  ++
Sbjct: 122 DELLEDFEFAPETAQSGLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGAL 181

Query: 181 ACMAHAPFIAAAGPGFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVP 240
             MAHAPFI++ GP FFG++SF  LP++KDLK  FE P++ KW+S R+SEDARY+GLT P
Sbjct: 182 GAMAHAPFISSVGPEFFGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAP 241

Query: 241 RFLLRTPYDPLECPVKTFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP 300
           RFLLR PYDP+E PVK+F Y ENV  SHEHYLWGNTA+AFATRLTDSFA++RWCPNIIGP
Sbjct: 242 RFLLRVPYDPIENPVKSFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGP 301

Query: 301 QSGGAVEDLPLHHFHSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSA 360
           QSGGAVEDLP+H F SMG +++KIPTEVL++DR+E+ELA+EGFIALTMRKGSDNAAFFSA
Sbjct: 302 QSGGAVEDLPVHVFESMGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSA 361

Query: 361 SSVQKPKHFGLSPEGKEAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGSWKERTDLEL 420
           +S+QKPK F  + EGKEAE NY+LGTQLPYMM++NRLAHY+KVLQREQ+G+WKER DLE 
Sbjct: 362 NSIQKPKVFPNTKEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLER 421

Query: 421 ELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVDGEPGWYRVNLSVRPHFKYMGADF 480
           ELN WI+QYVADQENP A+VR RRPLRAARI V DV+G PGWY+V+LSVRPHFKYMGA+F
Sbjct: 422 ELNSWIKQYVADQENPPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANF 481

Query: 481 TLSLVGKLDK 490
            LSLVG+LD+
Sbjct: 482 ELSLVGRLDQ 491