Pairwise Alignments

Query, 337 a.a., type VI secretion protein from Pseudomonas simiae WCS417

Subject, 335 a.a., Uncharacterized protein ImpH/VasB from Pseudomonas fluorescens FW300-N1B4

 Score =  454 bits (1167), Expect = e-132
 Identities = 229/335 (68%), Positives = 257/335 (76%)

Query: 1   MATTDGAAAPALTRLSLSIREYSLFQAVLQVIKRLRVAHPLLDEDALYDLLEFHANPGLG 60
           M TT G AAPAL+ L+  IREYSLFQAVL VI RLR AHP L ED LYD LEF ANP LG
Sbjct: 1   MDTTYGPAAPALSGLTRVIREYSLFQAVLLVIDRLRDAHPHLSEDDLYDQLEFQANPSLG 60

Query: 61  FPGHDIDRVEFFIEHEQLRARLRLNLLGLCGAGSPLPAFYGEQACADGVGGNTTRDFLDV 120
           FPG D+DRVEFF EH Q+RARLR NL+GL G+GSPLPAFYGEQA  D   GN TR+FLD+
Sbjct: 61  FPGSDVDRVEFFKEHGQMRARLRFNLIGLVGSGSPLPAFYGEQALGDSEDGNPTRNFLDL 120

Query: 121 FHHRLQRLMLPVWRKYRYRARFQAGARDTFSEQMFALIGLSGQQIRSIARLNCERLLPYL 180
           FHHRLQRLMLP+WRKYRYRA FQ+GA D FS Q+FALIGL G++IR    LN +RLLPYL
Sbjct: 121 FHHRLQRLMLPIWRKYRYRASFQSGALDPFSTQLFALIGLGGEEIRKAQELNWKRLLPYL 180

Query: 181 GMLGLRSHSASLIETVLRYYFKHHRLFIEQWVLRTVVIDDPQRNRLGNANSVLGHDQVLG 240
           G+L LR+HSA+LIE VLRYYFKH  L IEQ + R V I D QRNRLG ANS+LG D VLG
Sbjct: 181 GLLSLRAHSAALIEAVLRYYFKHAELTIEQCIERRVEILDEQRNRLGRANSMLGEDLVLG 240

Query: 241 CRVADRSGKFRVHLQGLGWQQLHGFLPTGADYPLLCSLVRLTARDPLEYDLRLVLAKEEI 300
             V DRSGKFR+H++ L WQ+ H FLP G  Y  LC+LVR T RDPL+YD+RLVL +EEI
Sbjct: 241 EHVRDRSGKFRIHIRELDWQRFHEFLPIGFGYQPLCALVRFTLRDPLDYDIRLVLRQEEI 300

Query: 301 RPLHIGEHNVCGLGWTSWLAHECADGVVMVSGNAH 335
           R L IGE N C LGWTSWL  E ADGVV +    H
Sbjct: 301 RELRIGEQNACRLGWTSWLGREKADGVVTLGSKIH 335