Pairwise Alignments

Query, 149 a.a., type VI secretion protein from Pseudomonas simiae WCS417

Subject, 158 a.a., type VI secretion system lipoprotein TssJ from Vibrio cholerae E7946 ATCC 55056

 Score = 57.4 bits (137), Expect = 1e-13
 Identities = 31/124 (25%), Positives = 65/124 (52%), Gaps = 4/124 (3%)

Query: 1   MCLLAGCSS---LSPFSTLTKLDLTLIAGDEVNPDLHGRPSPVVVQLLELRHPVAFENAD 57
           + +L  CSS     P    TK+  +L++ + VNP++ G  SP+ +Q+ EL+    F ++D
Sbjct: 11  LTVLTACSSSDKYEPAKEPTKVTFSLVSDEGVNPNIWGEASPIEIQVFELKDDSMFMSSD 70

Query: 58  FFSLYERAEQTLSKDWVNGEELELRPGEQQALK-LSVEPHSRYVGVLAAYRDLPHVQWRL 116
           +  +    ++ L  ++V   +  L PG+ + +    V+  + Y+GV+A + +    +W+ 
Sbjct: 71  YDQIKTDYKKALRSNFVKNYDYVLTPGQFKFVNAFEVDEETNYIGVMAHFAEPELSEWKK 130

Query: 117 VLPV 120
            + V
Sbjct: 131 AVKV 134