Pairwise Alignments

Query, 1111 a.a., type VI secretion protein VasK from Pseudomonas simiae WCS417

Subject, 1329 a.a., type VI secretion protein VasK from Burkholderia phytofirmans PsJN

 Score =  234 bits (596), Expect = 4e-65
 Identities = 300/1267 (23%), Positives = 482/1267 (38%), Gaps = 178/1267 (14%)

Query: 8    VGTVL-RKSWVYSLLLVLSCALLVWFFGPLLAVDDYRFWQSPTSRLLTISGLLLLW---G 63
            VG +L  K W   ++      LLVW+ GPLL+        S  +R++ I  +L L+   G
Sbjct: 55   VGALLWLKGWSTGVVFGALLCLLVWYAGPLLSFGRAAPLTSVAARVIAIGVVLALFAAFG 114

Query: 64   LAMVGMGARRT-ARLNQPEEHERHQRRALINEEIRQVRARFKEALQALKTSRRYGERS-- 120
            L  +    R   A L +       +        +++V AR   AL  LK S R G R   
Sbjct: 115  LYWLWQKMRSDEAFLKKALTFGGKKETPPAAGRLKEVEARINAALARLK-SMRTGARGVG 173

Query: 121  -----ERWRDELPWYLLIGEQGSGKTSLLAASGLPSPFDHPDAAPLGAASWC---DWYFA 172
                  R+  ELPW++ +G   SGKTS L  +GL  P         GA+      DW+ +
Sbjct: 174  RLFQGTRYLYELPWFIALGSTSSGKTSALLNAGLAFPIGGATPRTAGASVGTKNIDWWLS 233

Query: 173  EDAVLVEAAGRYL------------------GQPDPSVDAAG------------------ 196
             DAVL++ AG Y                    + D   D AG                  
Sbjct: 234  NDAVLIDTAGYYTRHGASTQSLPALADKRAENKDDNKDDNAGCGTAATQGTDAAVGDADW 293

Query: 197  --------WSTLLDLLKWRRRSRPLNGVVVTLSADTLSSSNEHDLERHARHVRTRLQDIQ 248
                    W   LDLL+  R   P+NG V+ +S D L++S+       A  +R RL D++
Sbjct: 294  RRRVDEDEWHGFLDLLRRHRPRAPINGAVLAISLDILTASDPAVRATEADMLRERLADLR 353

Query: 249  QTLHVDVPVYLVLTQSDRLAGFAEFFD-------AQQGDGTEQVLGGDLGTDLAQV-RDV 300
              L +  PVYL++TQ DRL+GFA++F        AQ    T  V G    +DLA V    
Sbjct: 354  TRLGIRFPVYLMITQMDRLSGFADYFGSLTEEHRAQMWGFTLPVNGQSARSDLAAVCNGE 413

Query: 301  FENLLQRLGGDLIPRLHQERNVERRGHMLDFPRQVARIGDALC-----LFIEAAFSVNRN 355
               L+ RL G +  RL  E ++ERR  +   P   A +   L      LF+++ +   +N
Sbjct: 414  LRQLVTRLAGGVNTRLEDEYDIERRRRLAALPEAFAALCAPLAELLGQLFVDSRYDATQN 473

Query: 356  QPINALRGFYLTCA----KTVDVRP---------------------------HFVQGLFK 384
              +  LRG Y T A    +TV   P                           +F+  LF 
Sbjct: 474  HTM--LRGVYFTSALQAGQTVTAEPLTVVQRLMAGRSRLFSADAARPAANHSYFLHDLFT 531

Query: 385  RVIFAEAD--QAGLLTPERQRIHRRHG---------WMALAATVVIGTVGAVWAHSYSFN 433
            +V+F EA   +  L    R R+ R  G         W+A+   V  G   + +  + +  
Sbjct: 532  KVVFPEAHLVRPNLRWEYRFRLLRLLGHTLGLVLFVWLAMGMRVSFGN-NSDYLDAIARK 590

Query: 434  HQRLLQLTGLIHTQTGTPPGADESHALLTLLDSRLAAT----QVFSPQAQARWIDRAGLY 489
             Q L      ++ +       D      TL ++R   T     +  P ++ R+    GLY
Sbjct: 591  SQALAAKVTQLYREPKPEAVPD------TLGEARYLPTWTGLDLSDPDSRFRY----GLY 640

Query: 490  QGALSIAPLAAAYEHTLQQRFLPYVATVLEGRVRGSLG--DREQLLDNLRAYLMLNLRER 547
                 +      Y        LP +   LE  +  S+   D +     LR YLML  + R
Sbjct: 641  SAPGVVEASRDTYRALEDNLLLPSIVHRLEDVIAESMANKDAKATYGALRVYLMLYDKAR 700

Query: 548  RDNAWLAEYVSGQWSGDSSAN-----KRLNEHFARLL--EQPFLAPL--DEALVARARLV 598
             ++  +  +V   W+ + SA+       + EH  +L   E+   +PL  ++ L+ +AR  
Sbjct: 701  FNSTDIKAWVLDDWAKNDSASIFGGRASMIEHVEQLFSGERIVQSPLIRNDGLIQQARAF 760

Query: 599  LRGESLAEVVYRALREQARNVEPYPLA--------EGPAFSRVEPP-----IPGFYT-RK 644
            L G +  + +Y   +   +   P             G  F+RV        +PG +T   
Sbjct: 761  LDGSNATQRLYERAKADMQKEAPDEFTLLRAVGPQAGTVFTRVSGAPLSRGVPGLFTFDG 820

Query: 645  YLQLFEQQGTQMVHAIAQDN-WVLGEGGDLGAADLRRLMLV-------------LEQRYF 690
            Y  LF+++  + V A   D+ WV+G    LG A  +   +V             + + Y 
Sbjct: 821  YQNLFDKRLPEFVQAARDDDAWVMGR-SYLGEAQKKTAEIVSTVTGADDPLTEAIRRLYL 879

Query: 691  SEYADVWSDALGRIRLRESGSLQQGAEYLASLTSAQSALVQLLQ-QVRENTRLVSVSDRL 749
            +EYA  W   LG IR     SL    + L    +  S L +L +  V E T   S++   
Sbjct: 880  TEYAQQWDAFLGDIRTVAGTSLAFNLQVLRQFAAPDSPLARLARAAVHETTLTQSIAAAN 939

Query: 750  ETAVQPVAG-LGAVTSRSLARAGLPDNARRALQRRFEPLHQLLDEQQNPGGELTQALRLL 808
             + +Q           ++L         R  +   F  L +++    +       A    
Sbjct: 940  GSLLQKTTDQFSQKADKALGIRAEERVERELVDGHFAALREMVTGSADTSAAEAPANAQA 999

Query: 809  DELQLQ-LSAVSRD--SSPEQAAFKMARQRMDGQQPLLGNLRDTAARFPQPLKGWFEGIA 865
             +  L  ++++  D  ++   A   +A   M         L+  A     P +    G++
Sbjct: 1000 GKTGLDGVTSLLNDYYTTLTVADNAIANNSMPPASDAAAKLKMAANTMLAPFRDVLLGLS 1059

Query: 866  DQSWRQLLDDAYGFVNQHYQNEVYGFYAKAIQRRYPFDAHAGSDVALGDFQAFFKPRGAM 925
             Q  R++       +++  Q  V       ++  YPF   +  DV++ DF   F   G +
Sbjct: 1060 VQGSREVNQGIGQLLSRQMQAVVSDTCRMTVEGNYPFAPDSPRDVSVDDFTRVFAQGGVI 1119

Query: 926  ARFYESYLRPFVIVEGNRYRLRGIEGRSLPMSRSLLEQLTRAQIIRQGFFTEDQGELAVR 985
              F+   L PFV      +R R + G + P+    LE    A+ IR  FF +   +L  +
Sbjct: 1120 DDFFTKNLAPFVDTSAKPWRYRTLPGATDPVRGPDLEPFQHARQIRDVFFGDQGKQLLWK 1179

Query: 986  FTLAPYSLDQAVSRATLRVGDQQLEYRHGPIVPVAFHWPNEAENGRSSLVLERGAERPLG 1045
              +    LD  V+   + +  Q + Y+HGP+ P A  WP       + +           
Sbjct: 1180 TDIRVPELDPTVTTLAIDIDGQTMLYQHGPVAPFAVSWPGPRGGVHAEMTASPRIRNETS 1239

Query: 1046 IEKDSGAWSLFRFFDLMQSEPASGRDAQVLKADLAGLRANYLLTSQRD-SSPFQMATWRT 1104
                 G W+L R     Q    +       + D  G +A   +T     ++P       T
Sbjct: 1240 TLVTDGPWALMRLLRKGQIVQTATPGRTRAEFDFDGRKAVLDITGAGSVANPLTSEVLTT 1299

Query: 1105 FRLPEQL 1111
            FR P  +
Sbjct: 1300 FRCPNSM 1306