Pairwise Alignments

Query, 841 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

Subject, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

 Score =  759 bits (1959), Expect = 0.0
 Identities = 407/813 (50%), Positives = 537/813 (66%), Gaps = 27/813 (3%)

Query: 2   VIWLLVGFAAAIALAYRQAVATLWLVTGLIWLAAGYLFNVVAGFGTAVAAI------LVV 55
           ++W+ V   A  ALAY +      L+T  I  A      +V   GTA A+I      + +
Sbjct: 4   LLWIFVMLFALGALAYLRVS----LLTSTIIAA------IVMALGTATASISPLAWLVFL 53

Query: 56  APALLMTIKPLRRTLLTRRALGLFRTIMPAMSDTERAAIESGTVWWDAELFSGKPNWQRL 115
           A  L + I   R++++TR  L L++ IMP MS TE+ AIE+GT WW+A+LF+GKPNW++L
Sbjct: 54  AITLPLNIGAFRKSVITRPLLKLYKGIMPEMSSTEKEAIEAGTTWWEADLFAGKPNWKKL 113

Query: 116 LQAAPASLSAEEQAFLDNEVETLCDIANDWETTQIWQDMSPEGWQYTKDAGFLGMIIPKQ 175
                A L+AEEQAF++  VE +C + N  + +    D+    WQY KD GF  MII K+
Sbjct: 114 HNYPVARLTAEEQAFIEGPVEEVCKMLNQHQVSHQLGDLPESIWQYLKDNGFFAMIIKKK 173

Query: 176 YGGKGFSHYAHSQVVMKLSTRCSAAAISVMVPNSLGPAELLLHYGTDAQRNYYLPRLARG 235
           YGG  FS YA S+V+ KL+   S  A +V VPNSLGP ELL HYGT AQ+++YLPRLA+G
Sbjct: 174 YGGLEFSAYAQSRVLQKLAGVSSELASTVGVPNSLGPGELLQHYGTPAQQDHYLPRLAKG 233

Query: 236 EDIPCFALTSPYAGSDAGAIPDLGIVCKGTHEGEEVLGFRVTWDKRYITLGPIATVLGLA 295
            ++PCFALTSP AGSDAGAIPD GIVCKG  +GEEVLG ++TW+KRYITL P+ATVLGLA
Sbjct: 234 LEVPCFALTSPEAGSDAGAIPDFGIVCKGQWQGEEVLGMKLTWNKRYITLAPVATVLGLA 293

Query: 296 FRAEDPDGLLGAPGSLGITCALIPTSHPGVNSGRRHWPLNAVFQNGPTTGKDVFIPLEWV 355
           F+ +DPD LLG    LGITCALIPT  PGV +GRRH+PLN +FQNGPT G +VF+PL+++
Sbjct: 294 FKLQDPDKLLGDKEELGITCALIPTDVPGVETGRRHFPLNCMFQNGPTRGNEVFVPLDFI 353

Query: 356 IGGREQVGNGWRMLMECLAAGRAISLPSANVGLGKVAVRGTTAYAAMRKQFGLPIGKFEG 415
           IGG E  G GWRML+ECL+ GR I+LPS + G  K A   T AYA +R+QF LPIGK EG
Sbjct: 354 IGGPEMAGQGWRMLVECLSVGRGITLPSNSAGGIKTAAVATGAYARIRRQFKLPIGKLEG 413

Query: 416 VQAPLARMAGHLYACDAVRKVSVASLDAGEKPSVISAIAKYHVTERARIIVNDGMDIVAG 475
           ++ P+AR+ G+ Y  DAV  ++   +D GEKPSVISAI KYH+T+R +  V D MDI  G
Sbjct: 414 IEEPMARIGGNAYLMDAVTTLTTTGIDLGEKPSVISAIVKYHLTDRMQKCVIDAMDIHGG 473

Query: 476 KGICMGPNNFLARAYQQSPIAITVEGANIMTRCLIIFGQGLIRCHPYVFREMEAARNPDR 535
           KG+C+G NN+L R YQ +PIAITVEGANI+TR +II+GQG IRCHPYV  EMEAA +PD 
Sbjct: 474 KGVCLGENNYLGRGYQAAPIAITVEGANILTRSMIIYGQGAIRCHPYVLAEMEAAFDPDM 533

Query: 536 RKALEAFDSAMFGHVSFVLANTVRAAVHSLTGGRLIAAPAKTEPALASYYRQANRLSVVL 595
            K+L  FDSA+FGH+ F  +N VR+    LT      +P K +     YY+  NR S  L
Sbjct: 534 HKSLNDFDSALFGHIGFTTSNLVRSFWLGLTSSYFSNSPYKDK--TKRYYQHMNRFSANL 591

Query: 596 ALISDISMGVLGGALKRKESITGRLGDMLSQLYILSCVLKRFEDDGRPQADLPLVHWSAQ 655
           AL+SD++M  LGG LKRKE ++ RLGD+LSQLY+ S  LKR++D+GR   DL LV W+ +
Sbjct: 592 ALLSDLAMATLGGGLKRKERVSARLGDLLSQLYLASATLKRYQDEGRQSEDLVLVQWAVE 651

Query: 656 DALLRAHEALAEVFDNYPSKPAAAVVRGLTFPFGIPLRKPSDRLLAQVADVVQTPGETRD 715
           DAL +  ++L ++ +N+P      V+R + FPFG PL++PSD L  +VA ++QTP  +RD
Sbjct: 652 DALYKLQDSLDDLLNNFP-MGLGRVLRVILFPFGRPLKRPSDVLDHKVAKIMQTPCASRD 710

Query: 716 RLLANSYIPRPEIDKLSYGELGFRLLPQVELIDARLKPAVKQGLIEP-MPISATAFTGWR 774
           RL    +      + +   E  F+ +   E +  ++  A   G   P M +   A  G  
Sbjct: 711 RLGKGQFWTPSPFNAVGIQEQTFKDILACEPLHDKICKAT--GKRHPFMWLDKLAAEG-- 766

Query: 775 VRARALDLISDDEDTLLGRYVEYADHGIQVDDF 807
              +AL ++SD+E  LL R        I VDDF
Sbjct: 767 ---KALGILSDEEVALLERAEIGRMKSINVDDF 796