Pairwise Alignments

Query, 567 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

Subject, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

 Score =  594 bits (1532), Expect = e-174
 Identities = 300/559 (53%), Positives = 408/559 (72%), Gaps = 10/559 (1%)

Query: 10  ERIWLNAYLPGVPADIDAGIEDYPSLREVFLEHLEKFRERVAYVSIGTEMTYADWQVQGV 69
           ++ WL+ Y   VP  I+   + YPSL E+F + + K+ ++ A++++G  MT+   + +  
Sbjct: 2   DKPWLSRYPKDVPETINP--DQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSR 59

Query: 70  AFAAWLQGQ-GVRKGERVALMMPNCLQYPICLLGTILAGAVVVNVNPLYTSHELKHLLKD 128
           AFAA+LQ    ++KG+RVALMMPN LQYP+ L G + AG + VNVNPLYT  EL+H L D
Sbjct: 60  AFAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLND 119

Query: 129 SGAETVVIFENFAHTLEKVITGSSVKRVVIAAIGDLLGTFKGAAMNFILRRVQKQVPAFN 188
           + A  +VI  NFA+TLE+++  + VK VV+ ++G +L   KG  ++F+++ V+  VP ++
Sbjct: 120 ADARAIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYD 179

Query: 189 LPGSVRFNQVLKQGRALNHFPVEMHLDALAFLQYTGGTTGDAKGVMLSHRNIIANLLQAK 248
           LPG++   + L +GR L +    M  + +AFLQYTGGTTG AKG +L+HRN++AN+LQAK
Sbjct: 180 LPGAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAK 239

Query: 249 AWVGDQLDQDKQETNVTLLPLYHIFSLTVNCLMFMCLGGRNILIANPRDVKRVQMILRKE 308
              G  L Q+ +E  VT LPLYH+F+LTVNCL+F+ +GGRN+LI NPRD+      L+K 
Sbjct: 240 GAYGPVL-QEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKY 298

Query: 309 RFNGIAGVNTLFNGLLENEAFCARDFSDLRMVIAGGMATHTAVAKRWKEVTGLPIIEGYG 368
            F  I GVNTLFN L+ NE F   DF ++++ + GGMA   AVA+RWK+ TG+ ++EGYG
Sbjct: 299 PFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYG 358

Query: 369 LTECSPVVSISPIDIARMREMEFTGSIGVPLPSTWVRFVREDGELAEIGEQGELQVRGPQ 428
           LTECSP+V+ +P D+      ++TG+IG+P+PST VR V + G +    + GELQVRGPQ
Sbjct: 359 LTECSPLVTGNPYDLT-----DYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQ 413

Query: 429 VMQGYWQRPEATAEVLDAEGWLSTGDIGVMDARGYIRLVDRKKDMILVSGFNVYPNEIED 488
           VMQGYWQRPEAT EVL+AEGWLSTGDI   D +G I +VDRKKDMILVSGFNVYPNEIED
Sbjct: 414 VMQGYWQRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIED 473

Query: 489 VVALHPAVAEVAAIGVEDGVTGEKVKIIVVRKDPNLTQEQILAHCREYLTGYKMPKYVEF 548
           VVALH  V EVAAIG  + V+GE VKI VV++DP+LT+++++AHCR++LTGYK+PK VEF
Sbjct: 474 VVALHGKVLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEF 533

Query: 549 RTTELPKTTVGKVLRRALR 567
           R  +LPKT VGK+LRR LR
Sbjct: 534 R-DDLPKTNVGKILRRVLR 551