Pairwise Alignments

Query, 567 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  219 bits (558), Expect = 2e-61
 Identities = 153/518 (29%), Positives = 249/518 (48%), Gaps = 13/518 (2%)

Query: 47  RERVAYVSIGTEMTYADWQVQGVAFAAWLQGQGVRKGERVALMMPNCLQYPICLLGTILA 106
           RE + Y       TY ++  +    A  L   G++KG+ + +   N   +   +  T   
Sbjct: 22  REFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATAKI 81

Query: 107 GAVVVNVNPLYTSHELKHLLKDSGAETVVIFENFAHTLEKVITGSSVKRVVIAAIGDLLG 166
           G V+V VN  Y SHEL +++K S  + + I ++F       I    V  +  +  G L  
Sbjct: 82  GVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTSQRGKLNS 141

Query: 167 TFKGAAMNFILRRVQKQVPAFNLPGSVRFNQVLKQGRALNHFPVEMHLDALAFLQYTGGT 226
                  N I    +K    +N    +     +   + +      +  D +  +QYT GT
Sbjct: 142 EEFPYLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEKLIEA-KKGLDSDDVINMQYTSGT 200

Query: 227 TGDAKGVMLSHRNIIANLLQAKAWVGDQLDQDKQETNVTLLPLYHIFSLTVNCLMFMCLG 286
           TG  KGVML+H+NI+ N      ++G++    ++E     +PL+H F + +  L  +  G
Sbjct: 201 TGFPKGVMLTHKNILNN----GYYIGEKQKFTEEERLCLPVPLFHCFGIVLGVLALLTHG 256

Query: 287 GRNILIANPRDVKRVQMILRKERFNGIAGVNTLFNGLLENEAFCARDFSDLRM-VIAGGM 345
           G  +++    D   V   ++KE+   + GV T+F     +  F   D S LR  ++AG  
Sbjct: 257 GTLVML-EIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEMFDLSSLRTGIMAGST 315

Query: 346 ATHTAVAKRWKEVTGLPIIEGYGLTECSPVVSISPIDIARMREMEFTGSIGVPLPSTWVR 405
               A+ K   ++    I   YGLTE SPV +++ +D    + +E   S+G  +P   V+
Sbjct: 316 CPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVDDPFEKRVE---SVGKAMPHCEVK 372

Query: 406 FVR-EDGELAEIGEQGELQVRGPQVMQGYWQRPEATAEVLDAEGWLSTGDIGVMDARGYI 464
            +  E GE    G  GE+  RG  VM+GY++ PE TAEV++ +GWL +GD+ V D  GY 
Sbjct: 373 IIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSGDLAVEDEDGYY 432

Query: 465 RLVDRKKDMILVSGFNVYPNEIEDVVALHPAVAEVAAIGVEDGVTGEKVKIIVVRKDP-N 523
           ++V R KDMI+  G N+YP EIE+ +   P + +   +G+ D   GE V   V+ K+   
Sbjct: 433 KIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFVIPKEGYE 492

Query: 524 LTQEQILAHCREYLTGYKMPKYVEFRTTELPKTTVGKV 561
           + +E +     E +  YK+PK+V F   E P T  GK+
Sbjct: 493 IKEEDVRDFALEKIARYKVPKHV-FVVEEFPMTASGKI 529