Pairwise Alignments
Query, 1212 a.a., chromosome segregation protein SMC from Pseudomonas simiae WCS417
Subject, 1013 a.a., nuclease SbcCD subunit C from Vibrio cholerae E7946 ATCC 55056
Score = 160 bits (404), Expect = 7e-43
Identities = 204/799 (25%), Positives = 338/799 (42%), Gaps = 146/799 (18%)
Query: 529 DNQQQLDQQAATLTQKLTDAQQQREQLNQAGLQTKAELSVAEQTLNVTKQLLERQRLA-- 586
++++QL + L LT AQ Q + Q +TKA A L + +Q + +Q+L
Sbjct: 220 ESEEQLQTELTELAPVLTHAQSQLKAEQQQWDETKAHYQAA---LELEQQFIRKQQLVVE 276
Query: 587 ------RSASVEELREQLQDDQPCPVCGSHEHPYHQPE--------------ALLQSLGR 626
++ +E LR+Q Q Q + +HQ + LLQ
Sbjct: 277 IATHQEQATHIEMLRQQRQQAQKAARLTAVHQQWHQAQKNLQQAKLKVEQQQTLLQQAKA 336
Query: 627 HDENEEAAAQKAVDTLKE--KLTELRGEVGGLIAQQKEYLQQQEHLATQ------QQALK 678
+ + A+Q+A +E KL E R + A+QK Q+ A Q A +
Sbjct: 337 QQQQAQQASQQASLACEEVPKLNEQR--ITWQRAEQKLLAQENVQQAVAKAERELQLATQ 394
Query: 679 PSLDAHPLYASLLNQETAKRSAWLEQQ------------LGQLTQSISQDEQRQGALLNL 726
+L+ L + +R W +QQ + QL Q + E+ Q L L
Sbjct: 395 NALNLQQASEKLEQELQNQRLEWEQQQRQLTRLEVQKARMNQLVQQVQAREREQSLLNEL 454
Query: 727 Q---QNAGRLQQQLQAAQDASQQARQLLVDQQRELAGDRERLDQELSAFANLLPADTLEG 783
Q Q R +QQ Q ++QA+ L + E A +R + A P
Sbjct: 455 QTAQQALLRFEQQHHHIQTQAEQAK--LTADKLEFAWHTQRAAELALALTQNEPCPVCGS 512
Query: 784 LRAEPAATFMQLDQQVNQRLEQLGHQRDELAEQQD------RQQAIEKEQTHQQHRQQQL 837
L A + D ++EQ Q+ + ++Q +QQ + EQ Q
Sbjct: 513 LEHPNKAQYSG-DVVTKVQVEQARQQQQDWVQRQQEAFHAWQQQGFKTEQIAQNLTTLSS 571
Query: 838 DALLQQV---NELASQQQTAQAKLSALLGEHSSAEHWQQQLE---QAVTQSRQSETDANK 891
+ LQQV NEL QQQ + ++AL + + + ++Q+E Q + ++ + N+
Sbjct: 572 ELTLQQVALLNELIEQQQILHSDIAAL--QQLNPDLLKRQIEEGEQRLAHTKMTLEKQNQ 629
Query: 892 QLQEIHNALIELAADL----------------------KAQQEREHALQAEHHALATRIS 929
Q+ L +L A+L + Q + E +AEH T
Sbjct: 630 NQQQAWQTLAQLQAELASLRQEIPPELSDLDTLRSAIGRVQNQIEILQKAEH----TARE 685
Query: 930 EWRALHPELDDAGLSHLLAYDDAQVSQLRQQ-------------------LQLSEKAVEQ 970
+W + ++ A + + SQ +Q+ L+ + ++
Sbjct: 686 QWVQAQKQFASVQAAYQAAIEAHRESQRQQEETTSAWQQGLLHSGFSDESAYLAARLTDE 745
Query: 971 AKVLLQEREQRLADHQALHNGNLEAQALDSALATLNQQLAEG---------EKICAELRA 1021
A V ++ + + + A+ +G E QAL LA N+ E EK+ L+A
Sbjct: 746 AIVNIERQIAQYEERSAMLSG--EQQALSRKLAEKNRPELEPLLVKVTQAEEKMALALQA 803
Query: 1022 RQSEDQRRQEANQAFAEHIAKAYD-------EWQRWARLNALIGSATGD--TFRKIAQAY 1072
++ Q R + Q A+ +A Y E+Q L+ + TG + +
Sbjct: 804 F-TQHQSRMDGLQRVAKQLADLYQKNRALEAEYQVVGTLSDIANGKTGAKVSLHRFVLGV 862
Query: 1073 NLDLLVHHANVQLRQLVR-RYRLKRG--------GSMLGLLVMDTEMGDELRSVHSLSGG 1123
LD ++ A+ +L ++ R RY LKR GS L L+V D+ G + R V +LSGG
Sbjct: 863 LLDDVLLQASQRLMKMSRGRYLLKRKEERAKGNVGSGLDLMVEDSYSG-KWRDVATLSGG 921
Query: 1124 ETFLVSLALALGLASMA---SSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKV 1180
E+F+ +L+LALGL+ + S +++++LFIDEGFGSLDPESL LA+ L LQ GR +
Sbjct: 922 ESFMAALSLALGLSDVVQAYSGGIRLDTLFIDEGFGSLDPESLDLAIQTLIDLQQGGRTI 981
Query: 1181 AVISHVQEMHERIPVQIQV 1199
+ISHV E+ E+I +++ V
Sbjct: 982 GIISHVTELKEQIGLRLDV 1000
Score = 154 bits (388), Expect = 5e-41
Identities = 224/889 (25%), Positives = 371/889 (41%), Gaps = 118/889 (13%)
Query: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR 60
M+ L + L+ AG EIDFT L A LF I G TGAGKS++LDA+C AL+G
Sbjct: 1 MRPLKLILQAFGPFAGREEIDFTK--LGDAPLFLINGATGAGKSSILDAICYALYGETTG 58
Query: 61 LGDTGQAKMPDADSDISIGDPRTLLRRGTGGGYAEVDF-VGVSGRRYRARWEANRARDKA 119
TG D + S+ EV F ++G RY+ + ++ K
Sbjct: 59 SERTGDQMRCDYAAPESL---------------TEVIFEFELAGARYQITRQPDQEIPKK 103
Query: 120 SGKLQNSRQ---SLIDLDSD--QLLASQKTEYKTQLELALGLNFEQFTRAVLLAQSEFSA 174
G+ + +L+ L SD +L+A++ + +GL+ +QF + ++L Q +F
Sbjct: 104 RGEGMTKKSHSATLVALKSDGNELIANKPNPVAKAVVELMGLDVKQFRQVMVLPQGKFRE 163
Query: 175 FLKANDNERSELLEKLTDTALYTQLGRRAFDKAKEAREAHKQLQDQATGVVPLAA-EARA 233
L AN ER ++ +L T LY+Q+ R F++A R+ ++ Q G + + E+
Sbjct: 164 LLTANSKEREQIFGQLFQTQLYSQIERALFERAAGIRKEKEEFDQQIKGTLSVVGLESEE 223
Query: 234 ELDQQFDAAQQHLKTQQAQLKQLELQHTWLKELREWQERQLATTEQLQRAQAEWDNQGQQ 293
+L + L Q+QLK + Q W E + + L +Q R Q
Sbjct: 224 QLQTELTELAPVLTHAQSQLKAEQQQ--W-DETKAHYQAALELEQQFIRKQQLVVEIATH 280
Query: 294 RDDLSRLDQLAPQRHQFARQAELSTLLAPLAAQIQLHRQ----QQGELHTRQEQAQQQQA 349
++ + ++ L QR Q + A L+ A Q H+ QQ +L Q+Q QQA
Sbjct: 281 QEQATHIEMLRQQRQQAQKAARLT------AVHQQWHQAQKNLQQAKLKVEQQQTLLQQA 334
Query: 350 SAQTALAQALKNQA----DAVPLLRQ-----AFEEQSTLA--HLTKELAKRIEDKQ---Q 395
AQ AQ QA + VP L + EQ LA ++ + +AK + Q Q
Sbjct: 335 KAQQQQAQQASQQASLACEEVPKLNEQRITWQRAEQKLLAQENVQQAVAKAERELQLATQ 394
Query: 396 HESACIEGQRQLTGLLEKQNQVAERLQRLSTELDRSAALAPLSDAWTAYRDRLQQLMLIG 455
+ + +L L+ Q E+ QR T L+ A R+R Q L+
Sbjct: 395 NALNLQQASEKLEQELQNQRLEWEQQQRQLTRLEVQKARMNQLVQQVQAREREQSLL--- 451
Query: 456 NRLNKGQAELPQLEQR---ATSAAEQFTQQREALDLLYQEAGAEPHAVA----EQIQLLA 508
N L Q L + EQ+ + AEQ + L+ + A A+A E +
Sbjct: 452 NELQTAQQALLRFEQQHHHIQTQAEQAKLTADKLEFAWHTQRAAELALALTQNEPCPVCG 511
Query: 509 SLLQDNRKQQRAFEDLTRLWDNQ-QQLDQQAATLTQKLTDAQQQR----EQLNQAGLQTK 563
SL N K Q + + +T++ Q +Q Q Q+ A QQ+ EQ+ Q
Sbjct: 512 SLEHPN-KAQYSGDVVTKVQVEQARQQQQDWVQRQQEAFHAWQQQGFKTEQIAQNLTTLS 570
Query: 564 AELSVAEQTLNVTKQLLERQRLARS--ASVEELREQLQDDQPCPVCGSHEHPYHQPEALL 621
+EL++ Q + + +L+E+Q++ S A++++L L Q E +
Sbjct: 571 SELTL--QQVALLNELIEQQQILHSDIAALQQLNPDLLKRQ-------IEEGEQRLAHTK 621
Query: 622 QSLGRHDENEEAAAQKAVDTLKEKLTELRGEVG-------------GLIAQQKEYLQQQE 668
+L + ++N++ A Q + L+ +L LR E+ G + Q E LQ+ E
Sbjct: 622 MTLEKQNQNQQQAWQ-TLAQLQAELASLRQEIPPELSDLDTLRSAIGRVQNQIEILQKAE 680
Query: 669 HLATQQ--QALKPSLDAHPLYASLL-------NQETAKRSAWLEQQLGQLTQSISQDEQR 719
H A +Q QA K Y + + Q+ SAW Q G L S +
Sbjct: 681 HTAREQWVQAQKQFASVQAAYQAAIEAHRESQRQQEETTSAW---QQGLLHSGFSDESAY 737
Query: 720 QGALLNLQQNAGRLQQQLQAAQDASQQARQLLVDQQRELAGDRERLDQELSA--FANLLP 777
A L + +++Q+ ++ S L+G+++ L ++L+ L P
Sbjct: 738 LAARLT-DEAIVNIERQIAQYEERSAM-----------LSGEQQALSRKLAEKNRPELEP 785
Query: 778 ADTLEGLRAEPAATFMQLDQQVNQRLEQLGHQRDELAEQQDRQQAIEKE 826
E A +Q Q R++ L +LA+ + +A+E E
Sbjct: 786 LLVKVTQAEEKMALALQAFTQHQSRMDGLQRVAKQLADLYQKNRALEAE 834