Pairwise Alignments

Query, 310 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 433 a.a., DUF58 domain-containing protein from Methanococcus maripaludis S2

 Score = 42.7 bits (99), Expect = 2e-08
 Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 20/202 (9%)

Query: 42  SKLRGRGVDFDQVRVYQTGDDVRTIDWRVTARTQEPHTKLFHEERERPIFIMVEQSCRLF 101
           SK   R  +FD +R Y  GD  R IDW+ + ++    +K F  E E  I ++++ S    
Sbjct: 176 SKTGQRTSEFDYLRDYNLGDQFRHIDWKSSLKSGRLISKEFLREFEGEITVIIDTSKNFL 235

Query: 102 --FGSGQMFKSVLAAQAASLIGWAALGHNDRVGGLVFGDNEHYEIKPR-RSKQSLLQLL- 157
             F  G +    ++  +  +I +    H      L F ++ H  +K   ++K+SL + + 
Sbjct: 236 KDFNGGTLKTDYVSILSFQIIYYLIKNHK-FANVLFFDESGHVTLKNNIKTKESLKKCMK 294

Query: 158 NRL--------VRVNQSLSTESRPEADALGMALRRGRE-------VLRPGSLVIVICDER 202
           N+L        +  ++S+ +E     D L   L+   E        ++P S  I+I D  
Sbjct: 295 NKLTSEKGIPYIPTSKSIISEKTAFLDILKPFLKNSPEKCLSILKYVKPNSTAIIITDIS 354

Query: 203 ALTEGAEQQLSLLSRHCDLLLL 224
              E       L  ++  L+++
Sbjct: 355 NYNEIITLNSELAKKNSKLMVI 376