Pairwise Alignments

Query, 250 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

Subject, 260 a.a., L-lysine ABC transporter, substrate-binding component (from data) from Sinorhizobium meliloti 1021

 Score =  226 bits (577), Expect = 3e-64
 Identities = 121/247 (48%), Positives = 160/247 (64%), Gaps = 8/247 (3%)

Query: 10  AAAVSMAFSATAMAETLKM--GIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVEKCE 67
           +AAV +  +  AMAE  K+  G E AYPPFNN ++ G + GFD DI  ALC +MK E C 
Sbjct: 12  SAAVFVLMAGVAMAEGEKVVIGTEGAYPPFNNLESDGTLTGFDIDIAKALCEEMKAE-CT 70

Query: 68  VYVSDWDGIIPALNAKKFDFLVSSLSITEERKAAVDFTDPYYSNKLQFIAPKATADFKTD 127
               DWDGIIPAL AKKFD +V+S+SITEERK  VDFT+ YY+     + PK +   +  
Sbjct: 71  FVTQDWDGIIPALIAKKFDAIVASMSITEERKQQVDFTNKYYNTPPAIVVPKDSPITEAT 130

Query: 128 AAYLKGKVIGAQRATLAGTYLEDKLPDTEAKLYDTQENAYLDLTSGRLDGILADKYVQYE 187
           AA L GK +GAQ +T    Y E  + ++E KLY T +   LDL +GR+D  + D  V  E
Sbjct: 131 AAALSGKALGAQGSTTHSNYAEAHMKESEVKLYPTADEYKLDLANGRIDAAIDDVVVLSE 190

Query: 188 WLKSKDGSAYEFKG----DPVVESDKIGIAVRKG-DPLRERLNKALAEIKADGTYKKIND 242
           WLK++DG+  +  G    DPV+  +  GIA+RKG D LRE+LNKA+  I+A+G YK+IN+
Sbjct: 191 WLKTEDGACCKLLGTLPIDPVINGEGAGIAIRKGDDALREKLNKAIEAIRANGKYKQINE 250

Query: 243 KYFPFSI 249
           KYFPF +
Sbjct: 251 KYFPFDV 257