Pairwise Alignments

Query, 250 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

Subject, 263 a.a., extracellular solute-binding protein, family 3 (NCBI) from Rhodospirillum rubrum S1H

 Score =  246 bits (628), Expect = 3e-70
 Identities = 131/241 (54%), Positives = 168/241 (69%), Gaps = 5/241 (2%)

Query: 12  AVSMAFS-ATAMAETLKMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVEKCEVYV 70
           AV+MA   A A AET++   E A+PPFN  DA+G   GFD DI +ALCA++K E C +  
Sbjct: 23  AVTMALGVADARAETIRFATEGAFPPFNFTDAAGKPQGFDIDIANALCAQLKAE-CSMVT 81

Query: 71  SDWDGIIPALNAKKFDFLVSSLSITEERKAAVDFTDPYYSNKLQFIAPKATADFKTDAAY 130
            DWDGIIP L AKK+D +++S+SIT ER+ +V FTD YY+N+  F+ PK   DF    A 
Sbjct: 82  QDWDGIIPGLLAKKYDAIIASMSITPERQQSVLFTDAYYNNQFHFVGPKGK-DFDLSKAG 140

Query: 131 LKGKVIGAQRATLAGTYLEDKLPDTEA-KLYDTQENAYLDLTSGRLDGILADKYVQYEWL 189
           LKGK IGAQRAT++  ++ED L DT +  LYDT E AYLDL +GR+D +L D Y  Y+WL
Sbjct: 141 LKGKAIGAQRATVSSQWIEDTLGDTVSLNLYDTAEEAYLDLEAGRVDLLLNDTYPTYDWL 200

Query: 190 KSKDGSAYEFKGDPVVESDKIGIAVRKGD-PLRERLNKALAEIKADGTYKKINDKYFPFS 248
            S  G AYE KG+ V++ D +GIA+RK D  L  +LN AL EI A+GTY KIN+KYFPFS
Sbjct: 201 NSPAGQAYELKGESVIKDDVVGIALRKDDTALAAKLNGALKEIIANGTYAKINEKYFPFS 260

Query: 249 I 249
           +
Sbjct: 261 L 261