Pairwise Alignments

Query, 235 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  189 bits (479), Expect = 5e-53
 Identities = 104/226 (46%), Positives = 143/226 (63%), Gaps = 3/226 (1%)

Query: 11  LVEDDEKLAGLIAHFLAQHGFEVRVEHRGDEALAAFLAFKPKIVVLDLMLPGQSGLHVCR 70
           ++EDD KL  ++A ++   GF+V     G+ A    L  +P +V+LDLMLPG++GL +CR
Sbjct: 9   IIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGLTICR 68

Query: 71  AIRAVSDTPIVILTAKEDDLDHILGLESGADDYVIKPIKPPVLLARLRALQRRQAPEPTV 130
            IRA     I++LTA +DD DH+  LE GADD+V KPIKP VLLAR+R L RR+      
Sbjct: 69  QIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMRREERTSAS 128

Query: 131 RGA---LAFGRLAIDRSCRVVSLGDDKIDLTTMEFELLWLLASNSGTILSRDDILNRMRG 187
             A   L FG L +++S R   L  + I+L+  EF+LLWLLAS +  ++SR+ +   +RG
Sbjct: 129 ADATHLLQFGGLLLNQSRRHCELDGEVINLSDSEFDLLWLLASAADQVVSREFLTKSLRG 188

Query: 188 IAFDGLNRSVDVYISKLRSKLNDNPREPVCIKTIWGKGYLFNPFAW 233
           I +DGL+R+VD  I  LR KL D+   P  I T+ GKGYLF P  W
Sbjct: 189 IEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLFVPDTW 234