Pairwise Alignments

Query, 327 a.a., C4-dicarboxylate ABC transporter from Pseudomonas simiae WCS417

Subject, 330 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

 Score =  385 bits (988), Expect = e-111
 Identities = 186/320 (58%), Positives = 250/320 (78%), Gaps = 1/320 (0%)

Query: 9   LCAATLFAAGLAQAADPIVIKFAHVVAENTPKGQGALLFKKLAQERLPGRVKVEVYPNSS 68
           L    L  A     A+PIVIKF+HVVA++TPKG+GAL+FK+LA+ERL G+V+VEVYPNS+
Sbjct: 7   LAGVLLALASACAQAEPIVIKFSHVVADDTPKGKGALMFKRLAEERLAGQVRVEVYPNST 66

Query: 69  LFGDGKEMEALLLGDVQMLAPSLAKFEQYTQQVQIYDLPFLFNDLAAVDRFQA-AQGKAL 127
           LFGD  E+EAL   +VQ+LAPSLAKFEQYT+Q+Q++DLPFLF+D+ AV+RFQ  A+GK L
Sbjct: 67  LFGDATELEALRNDEVQLLAPSLAKFEQYTKQLQVFDLPFLFDDIEAVNRFQKRAKGKQL 126

Query: 128 LTAMQDKNILGLAYWHNGLKQLSSNKALHEPKDARGLKFRVQASSVLEEQFKAIRANPRK 187
           L +M+DKNI GLAYWHNG+KQLS+ + L +P DA GL FR+Q S+VLE QF  + A+ +K
Sbjct: 127 LRSMEDKNITGLAYWHNGMKQLSATRMLRQPSDASGLSFRIQPSAVLEAQFGTVGASTQK 186

Query: 188 MSFAEVYQGLQTGTVNGTENTWSNYESQKVNEVQKYFTESNHGLIDYMVITNATFWNGLP 247
           + FA+VY  L+ GTV G EN WSN  S+K++ VQ Y  E++HG++DYMV++N  FW G+P
Sbjct: 187 IPFADVYDALRAGTVQGAENPWSNIYSKKMHTVQPYIIETDHGVLDYMVVSNTRFWMGMP 246

Query: 248 PDIRSTLEQIMVEVTVEVNKQAEALNQSAKQKIIDAKTSEIIELTPEQRQLWREAMRPVW 307
             IR  LE I+ EV+  VN++A+ LN++ +++I  A TSEI+ L+PE+R+ WREAMRPVW
Sbjct: 247 HKIRFELEAILDEVSFMVNREADELNRADRERIRQAGTSEIVALSPEERERWREAMRPVW 306

Query: 308 QKFEGEIGADLIKAADASNQ 327
           Q+FE  IGAD+IKAA+  N+
Sbjct: 307 QQFEPVIGADIIKAAETVNR 326