Pairwise Alignments

Query, 327 a.a., C4-dicarboxylate ABC transporter from Pseudomonas simiae WCS417

Subject, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  121 bits (304), Expect = 2e-32
 Identities = 87/324 (26%), Positives = 156/324 (48%), Gaps = 14/324 (4%)

Query: 1   MLKLSRALLCAATLFAAGLAQAADPIVIKFAHVVAENTPKGQGALLFKKLAQERLPGRVK 60
           M  +++  +   TL AA    AA    +K     +  + +   A +     +E   G +K
Sbjct: 1   MKTINKITIAILTLSAAASVNAAT--TLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIK 58

Query: 61  VEVYPNSSLFGDGKEMEALLLGDVQMLAPSLAKFEQYTQQVQIYDLPFLFNDLAAVDR-F 119
           + +YP++ L  D   ++ L LGD+ +      +   +  + +   LP++  D   + R F
Sbjct: 59  LALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMF 118

Query: 120 QAAQGKALLTAMQDK-NILGLAYWHNGLKQLSSNKALHEPKDARGLKFRVQASSVLEEQF 178
           ++  G+ +   M  K N   L  W+NG ++ +SN+ L+  +D +GLK RV  +       
Sbjct: 119 ESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYA 178

Query: 179 KAIRANPRKMSFAEVYQGLQTGTVNGTENTWSNYESQKVNEVQKYFTESNHGLIDYMVIT 238
           K   A+P  MSF+EVY  LQT  V+G EN     ++ K  EVQK    ++H + D MVI 
Sbjct: 179 KLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVII 238

Query: 239 NATFWNGLPPDIRSTLEQIMVEVTVEVNKQAEALNQSAK---QKIIDAKTSEIIELTPEQ 295
           + + W  L    +  +++        V K  +A  Q+ K    +++    SE I +T   
Sbjct: 239 SESTWQKLSDTDKDIIQK-------AVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPD 291

Query: 296 RQLWREAMRPVWQKFEGEIGADLI 319
            + +REAM+P++++F+  IG  ++
Sbjct: 292 LEPFREAMQPLYKEFDSNIGQPIV 315