Pairwise Alignments

Query, 327 a.a., C4-dicarboxylate ABC transporter from Pseudomonas simiae WCS417

Subject, 325 a.a., periplasmic C4-dicarboxylate transport protein from Sinorhizobium meliloti 1021

 Score =  119 bits (298), Expect = 1e-31
 Identities = 84/311 (27%), Positives = 155/311 (49%), Gaps = 9/311 (2%)

Query: 1   MLKLSRALLCAATLFAAGLAQAADPIVIKFAHVVAENTPKGQGALLFKKLAQERLPGRVK 60
           ++KL+  LL AA+ F    A A    V++ +    +  P  +G   F +L +ER  GR  
Sbjct: 4   LVKLAAGLLVAAS-FMGNAANAQT--VLRSSDTHPDGYPTVEGVKYFGELVKERTAGRYS 60

Query: 61  VEVYPNSSLFGDGKEMEALLLGDVQMLAPSLAKFEQYTQQVQIYDLPFLFNDLAAVDR-F 119
           VEVY ++ L  +   +E +  G +++   S+A F    ++  +  LP+LF     + +  
Sbjct: 61  VEVYHSAQLGEEKDTIEQVRSGVIELNRVSMAPFNGTVKESIVPALPYLFRSEEHMHKVM 120

Query: 120 QAAQGKALLTAMQDKNILGLAYWHNGLKQL-SSNKALHEPKDARGLKFRVQASSVLEEQF 178
             A G  +  A +   ++ LA++  G +   +  K ++  +D +GLKFRV  S +  +  
Sbjct: 121 DGAIGDQIKKAFEGAGVVVLAFYDAGARSFYNKQKPINTVEDMKGLKFRVIQSDIFVDMV 180

Query: 179 KAIRANPRKMSFAEVYQGLQTGTVNGTENTWSNYESQKVNEVQKYFTESNHGLIDYMVIT 238
            A+ AN   M + EVY G++TG ++G EN + +Y++ K  EV K ++   H ++  + + 
Sbjct: 181 AALGANATPMPYGEVYSGIETGVIDGAENNFPSYDTAKHFEVAKNYSLDEHTILPEVFVM 240

Query: 239 NATFWNGLPPDIRSTLEQIMVEVTVEVNKQAEALNQSAKQKIIDAKTSEIIELTPEQRQL 298
           N   ++ L P+ +   +Q   +    V KQ E      K+     + +     TPE +Q 
Sbjct: 241 NKAAFDKLTPEDQEIFKQAAKD---SVAKQRELWAAKVKESRAKVEAAGAKITTPE-KQG 296

Query: 299 WREAMRPVWQK 309
           + +AM+PV++K
Sbjct: 297 FIDAMKPVYEK 307