Pairwise Alignments

Query, 327 a.a., C4-dicarboxylate ABC transporter from Pseudomonas simiae WCS417

Subject, 330 a.a., substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 97.8 bits (242), Expect = 3e-25
 Identities = 87/320 (27%), Positives = 133/320 (41%), Gaps = 15/320 (4%)

Query: 4   LSRALLCAATLFAAGLAQAADPIVIKFAHVVAENTPKGQGALLFKKLAQERLPGRVKVEV 63
           L    +  A L AA LA AA    +++AHV AE   +   A    +       G V V V
Sbjct: 5   LKHGRVAGAMLGAALLAGAASATELRYAHVGAEGDIQTVYAAQAAEGIAAATGGEVTVTV 64

Query: 64  YPNSSLFGDGKEMEALLLGDVQMLAPSLAKFEQYTQQVQIYDLPFLFNDLAAVDRFQAAQ 123
           YP S L G  + ++ + +G + M     A   +   +V +++ PF++ D A        Q
Sbjct: 65  YPASQLGGVAEMVDGVRMGSISMGHHDFASLARLVPEVAVFNAPFIYRDGAHALAATDPQ 124

Query: 124 GKALLTAMQDK------NILGLAYWHNGLKQLSSNKALHEPKDARGLKFRVQASSVLEEQ 177
               L A+ +K       I+G  Y   G + +SSN  +  P D  G  FR     +    
Sbjct: 125 SSPALQAINEKLIAQGVRIVGRIY--RGDRHISSNFPVKTPADLAGKPFRAVPLELWVSM 182

Query: 178 FKAIRANPRKMSFAEVYQGLQTGTVNGTENTWSNYESQKVNEVQKYFTESNHGLIDYMVI 237
            K   A P  +  AE+   L TG V G EN  +   S  +NEVQ + + + H      V 
Sbjct: 183 VKGFGAIPTPVEVAELPTALMTGVVVGQENPLTRIASNNLNEVQSHLSMTGHMRAVLAVF 242

Query: 238 TNATFWNGLPPDIRSTLEQIMVEVTVEVNKQAEALNQSAKQKIIDAKTSEIIELTPEQRQ 297
            N   W GL  + R+ L +++ E   E  K  +   +S    + + K   +  +T E   
Sbjct: 243 INEEVWQGLSEEQRTALTKVLDE---EAQKSLKMATESEADLVKELKGRGMTVIT-EAEG 298

Query: 298 LWREAMRPVWQKFEGEIGAD 317
           L   A R   +K   +IG D
Sbjct: 299 LDVAAFR---EKVGAQIGQD 315