Pairwise Alignments

Query, 210 a.a., C4-dicarboxylate ABC transporter from Pseudomonas simiae WCS417

Subject, 214 a.a., tripartite ATP-independent periplasmic transporter DctQ (RefSeq) from Shewanella sp. ANA-3

 Score = 92.0 bits (227), Expect = 7e-24
 Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 50/222 (22%)

Query: 4   LRRVWEHLEEGFIAFLLAAMTLVTFVYVMLNNIYTLFFALADKWAWSSDFFGALGDHTMT 63
           + R++ + EEG +  L+  MTL+ F  V+    +   F                      
Sbjct: 2   ISRIFGYFEEGVLNLLITLMTLLVFTEVVARFFFNTGFL--------------------- 40

Query: 64  WAQDMTWSVALTKAMFGWLIFFGISYGVRTAGHLGVDALVKLTKRPVQRVLGMLACLCCL 123
                 W   LT  + GW + FG+SYGV+   H+GVDA VK      +++  ++  L CL
Sbjct: 41  ------WIQELTLTLCGWFVLFGMSYGVKVGAHIGVDAFVKNLPPKAKKITSLVTALICL 94

Query: 124 AYAGLFMIASYKWVTAVMGAHIGAEDL----------------DQYGIDVGDIVV----- 162
           AY GLF+  S+++++ +    +  ED+                +   IDV D  V     
Sbjct: 95  AYCGLFLKGSWEYLSQMYQIGVPMEDIHFPKFLLNSLDPDFAWNTLKIDVEDGAVPIWLS 154

Query: 163 --IVPIGFAMVFIRYLEIFYRIFTHRQVGLGLADEAGEASKL 202
             I+ IGF+M+  R+LE+F  I  ++  G   ADEA E+  L
Sbjct: 155 QSILLIGFSMLTWRFLELFIAILRNQVSGFQFADEAKESMHL 196