Pairwise Alignments

Query, 426 a.a., C4-dicarboxylate ABC transporter permease from Pseudomonas simiae WCS417

Subject, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  516 bits (1329), Expect = e-151
 Identities = 270/442 (61%), Positives = 339/442 (76%), Gaps = 21/442 (4%)

Query: 1   MAVLCLFLLLFVFMFLGVPIAISLGLSGAVSILMFSQDSVSSLAIKLFET-SDAYTFLAI 59
           MAV  LF+L+   M +GVPIAISLGLS  + +L  S  S++S+A  LF   +  YT LAI
Sbjct: 1   MAVALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAI 60

Query: 60  PFFLLSGAFMTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAAVG 119
           PFF+L+  FM+TGGVA+R+I FA A VG  RGGLAIA+V+ACM+FAALSGSSPATV A+G
Sbjct: 61  PFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIG 120

Query: 120 SIAVAGMVRSGYPKAFGAGIICNAGTLGILIPPSIVMVVYSAATETSVGKLFMAGVIPGL 179
           SI +AGMV++GY K F AG+ICNAGTLGILIPPSIVMVVYSAAT  SVG++F+ GV+PGL
Sbjct: 121 SIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGL 180

Query: 180 LLGLMLMIAIYIVARIKKLPAQPRATFREWLTSARRAFWGLLLLVIILGGIYSGMFTPTE 239
           L GLML+IAIYI ARIK LP QP   ++E L +A+ A WGLLL+VIILGGIY G+FTPTE
Sbjct: 181 LAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTE 240

Query: 240 AAAVAAVYSAFVALFIYKDM--------------------QLRDCPKVLLESGRLAIMLM 279
           AAAVAAVYS F+A FIY+DM                      +D    L ++G+L IMLM
Sbjct: 241 AAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLM 300

Query: 280 FIIANAMLFAHVLTTEQIPQEITAWVLSEGLTPIGFLIMVNVVLLIAGSFMEPSAIVLIL 339
           FIIANA++  HVLT E+IPQ IT  +LS GL PI FLI+VN++LL+ G FMEPS +++I+
Sbjct: 301 FIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIV 360

Query: 340 APIFFPIAMKLGIDPIHLGIVMVVNMEIGLVHPPVGLNLFVTSAVTGLTLGQTIRAALPW 399
           AP+ FPIA+ LGIDPIHLGI+MVVNMEIG++ PPVGLNLFVTS V  +++   ++AALPW
Sbjct: 361 APLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPW 420

Query: 400 LMILLVFLIMVTYLPFISLALP 421
           + ++ +FLI+VTY+P++S  LP
Sbjct: 421 VGVMFLFLIIVTYVPWVSTWLP 442