Pairwise Alignments

Query, 426 a.a., C4-dicarboxylate ABC transporter permease from Pseudomonas simiae WCS417

Subject, 437 a.a., large C4-dicarboxylate uptake permease, DedA family protein from Sinorhizobium meliloti 1021

 Score =  267 bits (682), Expect = 5e-76
 Identities = 150/419 (35%), Positives = 240/419 (57%), Gaps = 5/419 (1%)

Query: 8   LLLFVFMFLGVPIAISLGLSGAVSILMFSQDSV--SSLAIKLFETSDAYTFLAIPFFLLS 65
           LL+ V   L  PI  ++ + GA +  + + D +  ++ A ++ E S + + LA+P F+L+
Sbjct: 11  LLVVVLFLLSTPITWAMAI-GAFAFFLINMDMIPLANFAQEMAEGSQSVSLLALPLFVLA 69

Query: 66  GAFMTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAAVGSIAVAG 125
           G  M   G+ +RL+  A+  VGH+ G LA    +   L   L+ S+ A  A +       
Sbjct: 70  GCIMNASGITRRLLALADVLVGHMTGALAQMCTVLGTLLGGLTASANADAAMLAKTLGVE 129

Query: 126 MVRSGYPKAFGAGIICNAGTLGILIPPSIVMVVYSAATETSVGKLFMAGVIPGLLLGLML 185
           M + GY +AF A I  +A  +  LIPPSI ++VY    ETS+G+LF AGVIPGL+L   L
Sbjct: 130 MSQRGYSRAFAAVITSSAAIITSLIPPSIGLIVYGFLAETSIGRLFAAGVIPGLVLATGL 189

Query: 186 MIAIYIVARIK--KLPAQPRATFREWLTSARRAFWGLLLLVIILGGIYSGMFTPTEAAAV 243
           M+  Y +AR +  K   + RAT  E + +     W L + V+I  G   G+FT TEA AV
Sbjct: 190 MVTTYFIARKRGYKPLRKERATRAEGVRALIDGLWALSIPVVIFAGTRYGLFTTTEAGAV 249

Query: 244 AAVYSAFVALFIYKDMQLRDCPKVLLESGRLAIMLMFIIANAMLFAHVLTTEQIPQEITA 303
             VY  FVA+F Y++   R  P+VL E+ R + ++M +I  A  F   L  EQ+PQ ++ 
Sbjct: 250 VVVYVLFVAVFGYREFTFRQIPEVLAEAVRDSAVVMIMICAAAAFGFYLAWEQVPQAMSG 309

Query: 304 WVLSEGLTPIGFLIMVNVVLLIAGSFMEPSAIVLILAPIFFPIAMKLGIDPIHLGIVMVV 363
           W+      P+  L+++NV+L++ G+ +E SA ++IL P+  PI   +GID +H G+V + 
Sbjct: 310 WLGEATDNPLLMLLLINVLLIVIGTAIEGSAALIILTPMLIPIIDGVGIDRVHFGVVFIT 369

Query: 364 NMEIGLVHPPVGLNLFVTSAVTGLTLGQTIRAALPWLMILLVFLIMVTYLPFISLALPH 422
           N+ I  + PPVG  ++++S V  + +    R  LP+L +++V L+M++  P +SL LP+
Sbjct: 370 NLTIAGITPPVGGLMYISSMVLKVPMMAYAREVLPYLAMMMVILVMLSMFPQLSLWLPN 428