Pairwise Alignments

Query, 426 a.a., C4-dicarboxylate ABC transporter permease from Pseudomonas simiae WCS417

Subject, 466 a.a., alpha-ketoglutarate TRAP transporter, large permease component (from data) from Shewanella amazonensis SB2B

 Score =  513 bits (1321), Expect = e-150
 Identities = 267/459 (58%), Positives = 350/459 (76%), Gaps = 35/459 (7%)

Query: 1   MAVLCLFLLLFVFMFLGVPIAISLGLSGAVSILMFSQDSVSSLAIKLFE-TSDAYTFLAI 59
           M +  LFL LF+ M LG+PIAI+LG S  ++IL+FS DS++S+A+KL+E TS+ YT LAI
Sbjct: 1   MTIATLFLTLFLCMLLGMPIAIALGFSSMLTILLFSNDSLASVALKLYEATSEHYTLLAI 60

Query: 60  PFFLLSGAFMTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAAVG 119
           PFF+LS AF++TGGVA+R+IDFA   VGHIRGGLA+A+V+ACMLFAA+SGSSPATVAA+G
Sbjct: 61  PFFILSSAFLSTGGVARRIIDFAMDSVGHIRGGLAMASVMACMLFAAVSGSSPATVAAIG 120

Query: 120 SIAVAGMVRSGYPKAFGAGIICNAGTLGILIPPSIVMVVYSAATETSVGKLFMAGVIPGL 179
           SI + GMVR+GYP+ F AG+I  +GTLGILIPPSIVM+VY+AATE S  ++FMAG+IPGL
Sbjct: 121 SIVIVGMVRAGYPQKFAAGVITTSGTLGILIPPSIVMLVYAAATEVSAARMFMAGLIPGL 180

Query: 180 LLGLMLMIAIYIVARIKKLPAQPRATFREWLTSARRAFWGLLLLVIILGGIYSGMFTPTE 239
           L+G++LM+AIYIVARIK LP++P    +    S+ +A  GL L+ I+LG IY G+ +PTE
Sbjct: 181 LMGVLLMVAIYIVARIKNLPSRPFPGVKALSLSSAKAMGGLALIFIVLGSIYGGVASPTE 240

Query: 240 AAAVAAVYSAFVALFIYKDM-QLRDCP--------------------------------- 265
           AAAVA VY+  VA+F Y+D+  L++ P                                 
Sbjct: 241 AAAVACVYAYLVAVFGYRDIGPLKEVPWRKEGEAILAAIVRNLLHVGLGLIKTPTDKEIR 300

Query: 266 KVLLESGRLAIMLMFIIANAMLFAHVLTTEQIPQEITAWVLSEGLTPIGFLIMVNVVLLI 325
            V+ +  +++IML+FIIANAMLFAHVLTTE+IP  I   ++  GL P GFLI+VN++LL 
Sbjct: 301 NVVRDGAKVSIMLLFIIANAMLFAHVLTTERIPHIIAETIVGWGLPPWGFLIIVNLLLLA 360

Query: 326 AGSFMEPSAIVLILAPIFFPIAMKLGIDPIHLGIVMVVNMEIGLVHPPVGLNLFVTSAVT 385
           AG+FMEPSAI+LI+API FPIA++LGIDPIHLGI+MVVNMEIG++ PPVGLNLFVT+ +T
Sbjct: 361 AGNFMEPSAILLIMAPILFPIAVQLGIDPIHLGIIMVVNMEIGMLTPPVGLNLFVTAGIT 420

Query: 386 GLTLGQTIRAALPWLMILLVFLIMVTYLPFISLALPHWL 424
           G ++G  I A LPWL++LL FL+++TY+P ISL LP +L
Sbjct: 421 GRSIGWVIHACLPWLLLLLGFLVLITYVPQISLFLPEYL 459