Pairwise Alignments

Query, 426 a.a., C4-dicarboxylate ABC transporter permease from Pseudomonas simiae WCS417

Subject, 428 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Enterobacter sp. TBS_079

 Score =  333 bits (854), Expect = 6e-96
 Identities = 181/425 (42%), Positives = 270/425 (63%), Gaps = 6/425 (1%)

Query: 7   FLLLF---VFMFLGVPIAISLGLSGAVSILMFSQDSVSSLAIKLFETSDAYTFLAIPFFL 63
           F+LLF   + + LG+P+A ++GLS AV+  ++    + +L I++    + +T LAIPFF+
Sbjct: 4   FVLLFTLAILLALGMPVAFAVGLS-AVAGALWIDLPLEALMIQITSGVNKFTLLAIPFFI 62

Query: 64  LSGAFMTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAAVGSIAV 123
           L+GA M  GG+A+RL++FA   VG IRGGL++  ++A   F A+SGSS A  A++GS+ +
Sbjct: 63  LAGAIMAEGGIARRLVNFAYVFVGFIRGGLSLVNIVASTFFGAISGSSVADTASIGSVMI 122

Query: 124 AGMVRSGYPKAFGAGIICNAGTLGILIPPSIVMVVYSAAT--ETSVGKLFMAGVIPGLLL 181
             M + GYP+ + A +  +     ILIPPS   V+YS A     S+  LF+AGV+PGLLL
Sbjct: 123 PEMEKKGYPRDYAAAVTASGSVQAILIPPSHNSVIYSLAAGGTVSIATLFIAGVLPGLLL 182

Query: 182 GLMLMIAIYIVARIKKLPAQPRATFREWLTSARRAFWGLLLLVIILGGIYSGMFTPTEAA 241
           G+ LM      AR +  P   +  F++ L     A WGL+ +VIILGGI SG+FT TE+A
Sbjct: 183 GVSLMAMCLGFARKRGYPKGEKIPFKQALKITLDALWGLMTVVIILGGILSGIFTATESA 242

Query: 242 AVAAVYSAFVALFIYKDMQLRDCPKVLLESGRLAIMLMFIIANAMLFAHVLTTEQIPQEI 301
           AVA +++ FV +FIY+D +  + PK++  + +   ++M +I  A  F  V+T  Q+P  I
Sbjct: 243 AVACLWAFFVTMFIYRDYKWNELPKLMCRTVKTVTIVMILIGFAAAFGAVMTYMQLPSRI 302

Query: 302 TAWVLSEGLTPIGFLIMVNVVLLIAGSFMEPSAIVLILAPIFFPIAMKLGIDPIHLGIVM 361
           T +  S        L+ +N++LL+ G+ M+ + I+LIL P+  P+   LGIDP+H G++M
Sbjct: 303 TEFFTSLSDNKYVILMYLNIMLLLIGTLMDMAPIILILTPVLLPVTNSLGIDPVHFGMIM 362

Query: 362 VVNMEIGLVHPPVGLNLFVTSAVTGLTLGQTIRAALPWLMILLVFLIMVTYLPFISLALP 421
           +VN+ IGL+ PPVG  LFV SAV+   +   +RA LP+  +LLV L MVTY+P ISL LP
Sbjct: 363 MVNLGIGLITPPVGSVLFVASAVSKQKIEHVVRAMLPFYGMLLVVLAMVTYIPAISLWLP 422

Query: 422 HWLGM 426
             LGM
Sbjct: 423 RVLGM 427