Pairwise Alignments

Query, 426 a.a., C4-dicarboxylate ABC transporter permease from Pseudomonas simiae WCS417

Subject, 424 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  291 bits (744), Expect = 3e-83
 Identities = 160/422 (37%), Positives = 250/422 (59%), Gaps = 2/422 (0%)

Query: 1   MAVLCLFLLLFVFMFLGVPIAISLGLSGAVSILMFSQDSVSSLAIKLFETSDAYTFLAIP 60
           M ++ + + LFV + LGVP+A +LG  G +++L+    S       +  T D +  LA+P
Sbjct: 1   MTIILILVALFVLLLLGVPVAFALGGMG-LAMLILGGFSPLMAPQSILSTLDGFILLAVP 59

Query: 61  FFLLSGAFMTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAAVGS 120
            FLL    +  GGV + L     A VGH  GGLA+A +L+C LFAA+SGSS AT A +G+
Sbjct: 60  LFLLMSNLLLKGGVGRDLFAAVQAWVGHWPGGLAVATILSCALFAAISGSSVATAATIGT 119

Query: 121 IAVAGMVRSGYPKAFGAGIICNAGTLGILIPPSIVMVVYSAATETSVGKLFMAGVIPGLL 180
           +A+  M+  GY K F  G++   GTLGILIPPSI M+VY   TE SV  LF+AG+ PGLL
Sbjct: 120 VAIPEMINRGYEKKFVYGLLAAGGTLGILIPPSIPMIVYGFVTEQSVIALFLAGIGPGLL 179

Query: 181 LGLMLMIAIYIVARIK-KLPAQPRATFREWLTSARRAFWGLLLLVIILGGIYSGMFTPTE 239
           L  + ++   + AR+       P+AT  E +++++RA   + L  +++ G+YSG FTPTE
Sbjct: 180 LVTLFVLFAMLHARLSGTYTPVPKATMAERMSASKRALPSVALAALVIVGLYSGAFTPTE 239

Query: 240 AAAVAAVYSAFVALFIYKDMQLRDCPKVLLESGRLAIMLMFIIANAMLFAHVLTTEQIPQ 299
           AAA+ +  +  +     + +      + + ES      ++ I+A A +F   +   +IPQ
Sbjct: 240 AAAIGSAAALAIVTLWLRTLTWVTFWEAVRESAITTAAILLIVAGAKVFGKAIALYRIPQ 299

Query: 300 EITAWVLSEGLTPIGFLIMVNVVLLIAGSFMEPSAIVLILAPIFFPIAMKLGIDPIHLGI 359
           +I+A++      PI F+++V++VLL+ G   E  +++LI+ P+  P AM LG DPI  GI
Sbjct: 300 DISAFLTQVIDGPIMFIVVVSLVLLLMGLVFEALSMILIMTPVLLPAAMGLGFDPIWFGI 359

Query: 360 VMVVNMEIGLVHPPVGLNLFVTSAVTGLTLGQTIRAALPWLMILLVFLIMVTYLPFISLA 419
            MV+ +E  L+ PPVGLNL+V  +V   TL    R   P+L+++LV + ++   P ++L 
Sbjct: 360 YMVIMVECALITPPVGLNLYVIQSVARTTLSNVARGVWPFLILMLVTVGVLYAFPQLALY 419

Query: 420 LP 421
           +P
Sbjct: 420 IP 421