Pairwise Alignments

Query, 291 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  164 bits (415), Expect = 2e-45
 Identities = 101/289 (34%), Positives = 158/289 (54%), Gaps = 5/289 (1%)

Query: 1   MLRSHLPLNALRAFEASARHLSFTRAAIELCVTQAAVSHQVKSLEAQLNVTLFKRLPRGL 60
           M R   PLN+L+ FEA+ARHLSFTRAA EL VTQAAVSHQ+K+LE  L + LF+R  R L
Sbjct: 1   MSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSL 60

Query: 61  MLTSEGETLLPVVRDSFDRIAQTLSQFEGGHYREVLTVGAVGTFAVGWLLPRLPAFQTRY 120
           +LT EG++    ++D F  +A+   +      +  LT+    +FA+ WL+PRL  F  + 
Sbjct: 61  LLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQE 120

Query: 121 PFIDLRLSTHNNRVDVAAEGLDYAIRFGAGAWHGTEACELLEAPLTVLCVPQLA---EQL 177
           P ID+R+   +       + +D AI +G G+W G  A +L +  L  LC P L    + +
Sbjct: 121 PDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPM 180

Query: 178 HAPEDVLKHTLLRSYRADEWSLWFQAAGLPADTLVPRSIIFDSSLAMMEAALQGIGVALA 237
               D+  HTLL      +W  + +  GL  +  V    IF  S  +++AA  G GVAL 
Sbjct: 181 EKLSDLAYHTLLHDTSRKDWKQFAKENGLD-NVNVNHGPIFSHSTMVLQAAAHGQGVALG 239

Query: 238 PAMMFSRQLENDVIRQPFD-VGISTGSYWLTRLQSRAETPAMLAFKGWM 285
             ++   +++   +  PFD V ++  ++++   + +A+   +  F+ WM
Sbjct: 240 NNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWM 288