Pairwise Alignments

Query, 229 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  197 bits (501), Expect = 1e-55
 Identities = 104/219 (47%), Positives = 153/219 (69%), Gaps = 4/219 (1%)

Query: 1   MNWAVIIKWLPKLAQGAILTLELVAIAVIAGLLLAIPLGIARSSRRWYVSALPYAYIFFF 60
           M++++II  LP    G   T+ LV+++++ GLL AIPL IAR+S++ + S   + YI+F 
Sbjct: 1   MDFSLIIDSLPIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFL 60

Query: 61  RGTPLLVQLFLVYYGLAQFDSVRESFMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQA 120
           RGTPLLVQL+L+YYG+ Q+  V+++ +W +    ++CA     L+T+AY AEI+RGAI  
Sbjct: 61  RGTPLLVQLYLIYYGMDQWFPVKDT-LWEHA---WFCALVAFILNTSAYTAEIIRGAING 116

Query: 121 IPPGEIEAARALGMSKPKTLFYIILPRASRIGLPAYSNEVILMLKASALASTVTLLELTG 180
           +P GE+EAA+A GMS+ +T   IILP A R  LPAYSNEVI ML  SA+A  VT+++LTG
Sbjct: 117 LPKGEVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTG 176

Query: 181 MARTIIARTYLPVEIFFAAGLFYLLMAYVLVRGFKLLER 219
            AR + +R Y P E F +AGLFY+ + ++++  FK  E+
Sbjct: 177 AARLVNSRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQ 215