Pairwise Alignments

Query, 1324 a.a., Nitrate reductase (EC 1.7.99.4) (from data) from Pseudomonas simiae WCS417

Subject, 959 a.a., NAD-dependent formate dehydrogenase subunit alpha protein from Sinorhizobium meliloti 1021

 Score =  297 bits (761), Expect = 3e-84
 Identities = 208/706 (29%), Positives = 338/706 (47%), Gaps = 36/706 (5%)

Query: 5   SIRSVCPYCGVGCGIVMQVENNKVVKVIGDTAHPTNFGRLCTKGTTCGQAIADSGRMENA 64
           S+ + C YCGVGC    ++   ++V+++       N G  C KG           R+ N 
Sbjct: 250 SVVTTCAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYSNHRDRILNP 309

Query: 65  YVRQAREHDPVR-IGIDKAISETARRLRHILDTHGPQALAFYVSGQMSLEAQYLINKLAK 123
            VR+ +  DP R +  ++A +  A   R I   +G  ++    S + + E  +L+ KL +
Sbjct: 310 MVRE-KVTDPWREVTWEEAFAHVASEFRRIQYQYGRDSVGGITSSRCTNEETFLVQKLVR 368

Query: 124 GFVRTHHIESNSRLCMASAGSGYKLSLGADGPPGSYEDFDRADLFFVIGANMADCHPILF 183
                +++++ +R+C +  G G   + G       ++  +  D+  +IGAN  D HP+  
Sbjct: 369 AGFGNNNVDTCARVCHSPTGYGLNQTFGTSAGTQDFDSVEHTDVAVIIGANPTDGHPVFA 428

Query: 184 LRMMDRVKAGAKLIVVDPRR----NATADKANLFLPIKPGTDLALLNGLLHLLVKNGHTD 239
            R+  R++ GAKLIV+DPRR     +   +A+  LP+KPGT++A+L  + H++V  G  +
Sbjct: 429 SRLKKRLRQGAKLIVIDPRRIDLVRSAHVEASYHLPLKPGTNVAILTAIAHVIVTEGLAN 488

Query: 240 PAFIAAFTD--GWEAMPAFLED--YSPEHVAVITGLAEADIRQAADWIGQAAEWMSCWTM 295
            AFI    D   +E   AF+ +  +SPE     TG+    +R AA            + +
Sbjct: 489 EAFIRERCDWSEFEDWAAFVAEPHHSPEATEAYTGVPPELVRGAARLYATGGNGAIYYGL 548

Query: 296 GLNQSTHGTWNTNALCNLHLATGAICRPGSGPFSLTGQPNAMGGREMGYMGPGLPGQRSV 355
           G+ + + G+    A+ NL + TG I RPG G   L GQ N  G  +MG     LPG R +
Sbjct: 549 GVTEHSQGSTTVMAIANLAMLTGNIGRPGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHI 608

Query: 356 LVEADRAFIEDLWQIPPDSLPRQAGAGTVGMFEQMAAGQIKACWIICTNPVASVPNRQTV 415
             +A R   E LW +   +L  + G     M +    G  K  ++   + + S P+ + V
Sbjct: 609 SDDATREIFEKLWGV---TLNHEPGLRIPNMLDAAVEGTFKGLYVQGEDILQSDPDTKHV 665

Query: 416 IKGLQTAELVITQDAFLDTETNRYADILLPGALWAEAEGVMINSERNLTLMQKAVDAPGE 475
             GL   E V+  D FL+ ET  YA + LPG+ + E +G   N+ER +  +++ V  P  
Sbjct: 666 AAGLAAMECVVVHDLFLN-ETANYAHVFLPGSTFLEKDGTFTNAERRINRVRR-VMRPKN 723

Query: 476 TLPDWQIIARVASEMGFAEAFTYASASEVFEEIKRAWNPKTGYDIRGASYPRL-REKPLQ 534
              DW++  ++A  MG   A+ Y   SE+ +EI       T       SY  L +   +Q
Sbjct: 724 GYADWEVTQKMAQAMGL--AWNYRHPSEIMDEI-----AATTPSFAMVSYDYLDKMGSVQ 776

Query: 535 WPCASDTAADRNPIRYVDKGPVTFATDNGKAQFLARPHMPPAELPDEAFPFVLNTGRVQH 594
           WPC ++ A   +PI +VD          GK +F+   ++   E     FP +L TGR+  
Sbjct: 777 WPC-NEKAPLGSPIMHVD------GFVRGKGKFIRTEYVATDERTGPRFPLLLTTGRILS 829

Query: 595 QWHTLTKTGKVATLNKLNPGPFVELHAEDAARLGIKDKDRVEIRSRRGHAVLPAVITDRV 654
           Q++   +T +   +   +    +E+H  DA + GI+D D V + SR G   L A+ITDRV
Sbjct: 830 QYNVGAQTRRTENV-VWHAEDRLEIHPHDAEQRGIRDGDWVRLASRSGDTTLRALITDRV 888

Query: 655 RPGNCFAPFHWNDVFGDNLAINAVTNDAVDPISLQPEFKCCAVALA 700
            PG  +  FH       +   N +T D  D  +  PE+K  AV ++
Sbjct: 889 APGVVYTTFH-----HPSTQANVITTDFTDWATNCPEYKVTAVQVS 929