Pairwise Alignments

Query, 1324 a.a., Nitrate reductase (EC 1.7.99.4) (from data) from Pseudomonas simiae WCS417

Subject, 674 a.a., formate dehydrogenase H subunit alpha selenocysteine-containing from Methanococcus maripaludis S2

 Score =  399 bits (1026), Expect = e-115
 Identities = 238/699 (34%), Positives = 379/699 (54%), Gaps = 32/699 (4%)

Query: 6   IRSVCPYCGVGCGIVMQVENNKVVKVIGDTAHPTNFGRLCTKGTTCGQAIADSGRMENAY 65
           I ++CPYCG GCG+ + V++  +V       HP N G+ C KG+ C + +    R++   
Sbjct: 6   IHTICPYCGTGCGVDLVVKDGTLVGTNPFKRHPVNEGKTCIKGSYCHEFVHRDDRLKTPL 65

Query: 66  VRQAREHDPVRIGIDKAISETARRLRHILDTHGPQALAFYVSGQMSLEAQYLINKLAKGF 125
           +R+  E   V    D+A+   + +L++    + P+ + F+ S + + E  Y+  K A+  
Sbjct: 66  IRKNGEL--VEASWDEALELISGKLQN----YSPEEVGFFSSARCTNEDNYVFQKFARTV 119

Query: 126 VRTHHIESNSRLCMASAGSGYKLSLGADGPPGSYEDFDRADLFFVIGANMADCHPILFLR 185
           ++T++++  +RL  ++   G   + G+     S  D + AD  F+IG+N  + HP++  R
Sbjct: 120 IKTNNVDHCARL*HSATVVGLGQAFGSGAMTNSISDIEDADCIFIIGSNTFEQHPLIARR 179

Query: 186 MMDRVKAGAKLIVVDPRRNATADKANLFLPIKPGTDLALLNGLLHLLVKNGHTDPAFIAA 245
           ++   + G K+IV+DPR   TA +A+L+L + PGT++A+LN ++H+LVK    D  FI  
Sbjct: 180 VVRAKEKGTKIIVIDPRYTPTAKQADLYLQLLPGTNIAVLNAIMHVLVKENLVDEEFIKN 239

Query: 246 FTDGWEAMPAFLEDYSPEHVAVITGLAEADIRQAADWIGQAAEWMSCWTMGLNQSTHGTW 305
            T G+E +   LE Y+PE+ + ++G+A   I +AA   G A      + MG+ Q T G  
Sbjct: 240 RTKGYEELKTTLETYTPEYASKLSGVAPELIVEAAKMYGSANAASILYCMGITQFTTGVN 299

Query: 306 NTNALCNLHLATGAICRPGSGPFSLTGQPNAMGGREMGYMGPGLPGQRSVLVEADRAFIE 365
           N  + CNL + TG I +PG+G   L GQ N  G  +MG +    PG ++  V A+     
Sbjct: 300 NVKSCCNLAMITGNIGKPGTGVNPLRGQNNVQGACDMGALPNVFPGYQA--VPANHEKYA 357

Query: 366 DLWQIPPDSLPRQAGAGTVGMFEQMAAGQIKACWIICTNPVASVPNRQTVIKGLQTAELV 425
           + W    D      G     M  + A  Q+K  +++  NP+ S P+   V   L++ +L+
Sbjct: 358 EAWNTCVDP---NVGLSIPDMLAK-AGEQVKCIYVMGENPMVSDPDIHHVEHALKSLDLL 413

Query: 426 ITQDAFLDTETNRYADILLPGALWAEAEGVMINSERNLTLMQKAVDAPGETLPDWQIIAR 485
           I QD FL TET + AD++LPGA WAE +G   N+ER +  + KAVD+PGE + DW+I+  
Sbjct: 414 IVQDIFL-TETAQVADVVLPGASWAEKDGTFSNTERRIQKINKAVDSPGEAIADWKIVKM 472

Query: 486 VASEMGFAEAFTYASASEVFEEIKRAWNPKTGYDIRGASYPRLREKPLQWPCASDTAAD- 544
           +A +MG  E F + +A EVF+EI      K      G +Y RL    L WPC   T  D 
Sbjct: 473 LAEKMGQGELFNFNTAEEVFQEI-----AKVTPQYAGVTYERLGVDGLHWPC--KTCEDP 525

Query: 545 RNPIRYVDKGPVTFATDNGKAQFLARPHMPPAELPDEAFPFVLNTGRVQHQWHTLTKTGK 604
             PI + +K      T +G     A  +  P E+ D  +P  L TGR+   +HT T T +
Sbjct: 526 GTPILHCEK----CLTPDGLGNIFAIDYADPDEMADSEYPMTLTTGRIIFHYHTGTMTRR 581

Query: 605 VATL-NKLNPGPFVELHAEDAARLGIKDKDRVEIRSRRGHAVLPAVITDRVRPGNCFAPF 663
              + +++N G FVE+H EDA ++GIK+K +V++ +RRG  V+ A IT  ++ G  F PF
Sbjct: 582 SKHMADEINEG-FVEIHPEDAEKMGIKNKQKVKVSTRRGEVVVNAKITPNIKQGVVFMPF 640

Query: 664 HWNDVFGDNLAINAVTNDAVDPISLQPEFKCCAVALARV 702
           H+ +      A N +TN A DP    PE+K CA  + ++
Sbjct: 641 HFAET-----AANILTNPAQDPNCKIPEYKVCAAKVEKI 674