Pairwise Alignments

Query, 1324 a.a., Nitrate reductase (EC 1.7.99.4) (from data) from Pseudomonas simiae WCS417

Subject, 676 a.a., formate dehydrogenase H subunit alpha selenocysteine-containing from Methanococcus maripaludis S2

 Score =  363 bits (933), Expect = e-104
 Identities = 219/697 (31%), Positives = 363/697 (52%), Gaps = 27/697 (3%)

Query: 6   IRSVCPYCGVGCGIVMQVENNKVVKVIGDTAHPTNFGRLCTKGTTCGQAIADSGRMENAY 65
           + ++CPYCG GCGI + V++ KVV       HP N G++C KG  C + +    R+    
Sbjct: 7   VHTICPYCGTGCGIDLVVKDGKVVDSHPFKRHPVNEGKVCIKGNYCYEFVHSEDRLTKPL 66

Query: 66  VRQAREHDPVRIGIDKAISETARRLRHILDTHGPQALAFYVSGQMSLEAQYLINKLAKGF 125
           +++  E   +    D+A+   A +L+     + P  +AF+   + + E  Y + K A+  
Sbjct: 67  IKKNGEF--IEATWDEALDLIAGKLKQ----YSPDEVAFFSCARGTNEESYALQKFARTV 120

Query: 126 VRTHHIESNSRLCMASAGSGYKLSLGADGPPGSYEDFDRADLFFVIGANMADCHPILFLR 185
           ++T++++  +R+  A    G     G+     S  D  +AD+  + G+N  + HP++   
Sbjct: 121 LKTNNVDHCARI*HAPTVVGLGECFGSGAMTNSITDLAQADVLLIYGSNTFEAHPLIARS 180

Query: 186 MMDRVKAGAKLIVVDPRRNATADKANLFLPIKPGTDLALLNGLLHLLVKNGHTDPAFIAA 245
           ++   + G K+I +DPR   TA  A+L L + PG+++ L+N + +++++ G  D  FI  
Sbjct: 181 IVKAKENGTKIIAIDPRTTHTAKMADLHLKLIPGSNIDLINTITNIIIQEGMADEEFIKN 240

Query: 246 FTDGWEAMPAFLEDYSPEHVAVITGLAEADIRQAADWIGQAAEWMSCWTMGLNQSTHGTW 305
            T+G++ +   +  Y+ E  A ++G+    I +AA   G A      + +G+ + T G  
Sbjct: 241 RTEGYDELKDVVSKYTLEKTAELSGIPAETILEAARMYGSAENASIMYCLGVTEYTFGVD 300

Query: 306 NTNALCNLHLATGAICRPGSGPFSLTGQPNAMGGREMGYMGPGLPGQRSVLVEADRAFIE 365
           N  + CNL + TG + RPG+G   L GQ N  G  +MG +    PG + V    +R  +E
Sbjct: 301 NVKSCCNLAMVTGNLGRPGTGVNPLRGQNNVQGACDMGALPNVFPGYQKVGEAYER--LE 358

Query: 366 DLWQIPPDSLPRQAGAGTVGMFEQMAAGQIKACWIICTNPVASVPNRQTVIKGLQTAELV 425
           +LW+     L R+ G  +  +  + A  Q+K   I+  +P+ +  +   V K L++ +  
Sbjct: 359 NLWETA--DLNREIGLTSPEVLHK-AGEQVKFLHIVGEDPMVADADINHVEKALKSLDFF 415

Query: 426 ITQDAFLDTETNRYADILLPGALWAEAEGVMINSERNLTLMQKAVDAPGETLPDWQIIAR 485
           + QD FL TET + AD++LP A WAE +G   NSER +  ++KAVDAPG+ LPDW I+ +
Sbjct: 416 VVQDIFL-TETAKLADVVLPAACWAEKDGTFTNSERRVQRIRKAVDAPGDALPDWLIVRK 474

Query: 486 VASEMGFAEAFTYASASEVFEEIKRAWNPKTGYDIRGASYPRLREKPLQWPCASDTAADR 545
           +A +MG  E   + SASE+F+E+      K      G S+ RL    LQWPC +      
Sbjct: 475 LAEKMGAGEKLNFESASEIFDEM-----AKVIPQYAGMSFERLGIDGLQWPCKTPEDPG- 528

Query: 546 NPIRYVDKGPVTFATDNGKAQFLARPHMPPAELPDEAFPFVLNTGRVQHQWHTLTKTGKV 605
            PI + +K    F   NG  +F    H    EL DE +P +L TGR+   +++ T T + 
Sbjct: 529 TPILHKEK----FLRPNGLGKFTPVEHKDADELIDEEYPLILTTGRIIFHYNSGTMTRRC 584

Query: 606 ATLNKLNPGPFVELHAEDAARLGIKDKDRVEIRSRRGHAVLPAVITDRVRPGNCFAPFHW 665
            ++       F+E++ EDA  LGIK  ++V + SRRG     A +T+ V  G  +  FH+
Sbjct: 585 DSITNEIDENFIEINTEDAKELGIKPGEKVRVSSRRGTVNADARVTENVIKGVVYMSFHF 644

Query: 666 NDVFGDNLAINAVTNDAVDPISLQPEFKCCAVALARV 702
            +      A N +TN A DP+S   E K CAV + ++
Sbjct: 645 LEE-----ATNKLTNSAYDPVSKTAELKICAVKVEKI 676