Pairwise Alignments

Query, 497 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  168 bits (426), Expect = 5e-46
 Identities = 108/292 (36%), Positives = 157/292 (53%)

Query: 204 LAKRFDHFLQQITHLIDGVARDSHGLGQLGQELASASGTLEKGARHQLAEITQMTGSMQR 263
           LA +F+ F+ ++  ++  V   S  L Q     A+++    K  R Q  EIT +  ++  
Sbjct: 346 LADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTE 405

Query: 264 MEDAMGHIAVHVEQAVDHAGKASQQILRGQESVGRAQQEITQLASRLNGTHETVQGLAVQ 323
           M  A   IA + E    +A ++ Q    G   + +++Q I QLA  L G    +  L V 
Sbjct: 406 MASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVH 465

Query: 324 AEQIGTVLDVISGIANQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQRTAVSTQEI 383
           A +I T+L  I GIA QTNLLALNAAIEAARAGEQGRGFAVVADEVR L+QRT  ST+EI
Sbjct: 466 ANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEI 525

Query: 384 KTIIESLQHGSRQAVEAMHDSRQGVDRCVEDSQVAVDMLRAVGSDIAQIDDLNGRIVTTT 443
           +T I  LQ  +  AV  M +S + V+  V D       L+A+   I QI D+  +I +  
Sbjct: 526 QTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAA 585

Query: 444 REQTEANLEIVGRLQSVQSIAQSTANDVETLARSSEQLPPIAVRLDALGRRF 495
            EQ+    +I    +SV+ ++   A + +   + ++ L  +A  L+    RF
Sbjct: 586 EEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRF 637