Pairwise Alignments

Query, 497 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  180 bits (457), Expect = 1e-49
 Identities = 109/292 (37%), Positives = 170/292 (58%)

Query: 204 LAKRFDHFLQQITHLIDGVARDSHGLGQLGQELASASGTLEKGARHQLAEITQMTGSMQR 263
           L+K F+ F+++I   I  VA+ S  L    + ++  +      ++ Q  +  Q+  ++ +
Sbjct: 351 LSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQ 410

Query: 264 MEDAMGHIAVHVEQAVDHAGKASQQILRGQESVGRAQQEITQLASRLNGTHETVQGLAVQ 323
           M   +  IA +   A + A +AS    +G+  V +A++ I++LA  +  T + V+ LA  
Sbjct: 411 MGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLAST 470

Query: 324 AEQIGTVLDVISGIANQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQRTAVSTQEI 383
            ++IG++LD I GI+ QTNLLALNAAIEAARAG+QGRGFAVVADEVRNLA RTA ST+EI
Sbjct: 471 TQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEI 530

Query: 384 KTIIESLQHGSRQAVEAMHDSRQGVDRCVEDSQVAVDMLRAVGSDIAQIDDLNGRIVTTT 443
           + +I  LQ+ ++ AV AM   +    + V  S  AV +L ++   I  I D N ++ T T
Sbjct: 531 QKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATAT 590

Query: 444 REQTEANLEIVGRLQSVQSIAQSTANDVETLARSSEQLPPIAVRLDALGRRF 495
            EQ+     I   ++ + +I + T +  E LA +S+ L  ++ RLD L   F
Sbjct: 591 EEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNF 642