Pairwise Alignments

Query, 317 a.a., 2-hydroxyacid dehydrogenase from Pseudomonas simiae WCS417

Subject, 318 a.a., glycerate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  150 bits (380), Expect = 3e-41
 Identities = 99/313 (31%), Positives = 163/313 (52%), Gaps = 16/313 (5%)

Query: 7   VIDDWQHVASDVVNWSVLEAVGQVHFLHDYPTDTATMIERLKGFEVICVMRERSTFDKAL 66
           V+ D + +    ++W  +  +G+  F     T  A +I R +  E+  V   ++  D   
Sbjct: 4   VVLDGETLNPGDLSWQAISDLGK--FSCFARTPDAEIIPRAQDAEI--VFTNKTPLDAKT 59

Query: 67  LQGLPKLKLLVTGGMRNAAIDLPAARALGITVCGTDSYKH-AAPELTWALIMASTRNLLA 125
           L  LPKLK +         +D+ AA+ LGI V    +Y H A  ++ +A I+  T+ + A
Sbjct: 60  LAQLPKLKYVGVLATGTNVVDIAAAKDLGIVVTNVPAYGHDAVAQMVFAHILHHTQAVAA 119

Query: 126 EANALRAGHWQVGLG--------GDLYGKTLGVLGLGSIGQKVAKFAQVFGMRVIAWSEN 177
              A+ AG W               L GKTLG++G G IGQ+VAK A  FGM+V+     
Sbjct: 120 HHQAVAAGQWTSCSDFCFTLMPLQSLKGKTLGLIGYGDIGQQVAKLALAFGMKVLV--NT 177

Query: 178 LTPERAAESGVTWVSKQALFEQADILTVHLVLSDRSRGLVDAEALGWMKPSARLVNTARG 237
            T       GV+W S+  + +++DIL++H  L+  +  L++A+ L  MKP A L+NTARG
Sbjct: 178 RTEPAHLPQGVSWTSRDKVLKESDILSLHCPLTPETNELINAQTLELMKPQALLINTARG 237

Query: 238 PIVDESALVRALESGRLAGAALDVYTEEPLPVDHPFRRLPNVLATPHVGYVSEQNYRQFY 297
            ++DE+AL  AL  GR+  A +DV + EP  +D+P    PN+  +PH  + +++  +   
Sbjct: 238 GLIDEAALAVALTQGRVF-AGVDVLSTEPPSMDNPLLSAPNISTSPHNAWATKEARQNLL 296

Query: 298 AQMIEDIQAWANG 310
               E+++++  G
Sbjct: 297 NIATENLKSFLQG 309