Pairwise Alignments

Query, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 626 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  223 bits (567), Expect = 3e-62
 Identities = 156/517 (30%), Positives = 253/517 (48%), Gaps = 13/517 (2%)

Query: 147 QSWYKGGLASPRGQCAWAAAYKDDASQEPRTNCAMAIQRDGVPYGVATIDVTLGFFNDLV 206
           + WYK   A+   Q      Y   +S +     A  +Q      GVA  D+ L   + ++
Sbjct: 123 RGWYKA--ANSAQQTIVTEPYIAASSGKLVITVATPVQHQNQMIGVAGADIDLSSVSAII 180

Query: 207 ASKEKDIGGQMLIVEGDGKIISNSTRISSPVVLKNISELTGTSAFAAQVSKALAQRDQAL 266
            S      G   IV  DGKI+ +     S  VLK ++E     A   Q+S  + + D   
Sbjct: 181 NSLNFGGHGHAFIVSADGKILIHP---DSKRVLKTLAEAYPNGA--PQISPGVKEVDL-- 233

Query: 267 QRSEFDNQGVASTFYMRPIAGTPWFLATALPTALITAQRDDVLGTLALLQIPMVLLLVLL 326
              +   Q ++ T ++  + G  W++A  L      A   +   +  +  +  V+ ++ L
Sbjct: 234 ---DGKTQFISFT-HVNGVPGADWYVALVLDKDTALAMLSEFRTSALIAMVIAVVFIIAL 289

Query: 327 AVYAIRQLVQRMKSLKTNIDALSTGDADLTRRITIRAEDELGAIGHSVNRFIVYLQNMIG 386
               IR L+Q + ++   +  ++ G+ DLTRR+ I   DE GA+G S NRF+  +   I 
Sbjct: 290 LGMLIRVLMQPLLTMGRAMHDIAEGEGDLTRRLVIHGHDEFGALGTSFNRFVERIHTSIR 349

Query: 387 EVTQATGAMSSSLEQLQRTSAHTNQILVRHASETDQTVTAITEMSSTADTVAQNAAETAA 446
           EV  ATG ++    ++   S  +     + AS T     AI ++ + A  +AQNAA  + 
Sbjct: 350 EVASATGQVNEVALRVVSASNSSMFNSDQQASRTSSVAAAINQLGAAAQEIAQNAALASQ 409

Query: 447 FTQRANEHADRSRVVVGEASNSVSALIGEVSSATHSVENMRQDAARITETLGVIGAIAGQ 506
            +  A   A+  + VV +   ++  L  ++S +  ++E +  +   I + L VI +I+ Q
Sbjct: 410 HSSDARSLAEDGQQVVDKTIAAMQQLSAKISDSCGNIETLNSNTVNIGQILEVITSISQQ 469

Query: 507 TNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTSQINEMLTRLTAGVSSSVAA 566
           TNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ S  Q+ +M+  L  G   +V  
Sbjct: 470 TNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQDSAQQVQKMIEELQVGAREAVLT 529

Query: 567 MENTQASCQSAADATARVNTGLDEMAGSVSHINNLSTQIATAAEQQSAVTEEINRSMVQI 626
           M ++Q   +S+     +    L  +   +  I+ ++  +ATA E+Q+AV E IN  + +I
Sbjct: 530 MTDSQRQSESSVGIANQAGERLGSVTQRIGEIDGMNQSVATATEEQTAVVESINVDITEI 589

Query: 627 RQMVEELVQSGHATETNTQSLLDANGRVIALMGRFKV 663
             + +E V++  AT      L     R+  L+G F++
Sbjct: 590 NTLNQEGVENLQATLRACADLEQQAARLKQLVGSFRI 626